DRSC/TRiP Functional Genomics Resources

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Protein Alignment f-cup and PIRL5

DIOPT Version :9

Sequence 1:NP_001262544.1 Gene:f-cup / 41677 FlyBaseID:FBgn0028487 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_179336.1 Gene:PIRL5 / 816250 AraportID:AT2G17440 Length:526 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
f-cupNP_001262544.1 leucine-rich repeat 111..140 CDD:275380
LRR_RI 155..>377 CDD:238064
leucine-rich repeat 158..180 CDD:275380
LRR_8 180..235 CDD:290566
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..226 CDD:275380
LRR_8 225..283 CDD:290566
leucine-rich repeat 227..249 CDD:275380
leucine-rich repeat 250..272 CDD:275380
LRR_8 272..329 CDD:290566
leucine-rich repeat 273..295 CDD:275380
leucine-rich repeat 296..318 CDD:275380
LRR_8 317..375 CDD:290566
leucine-rich repeat 319..340 CDD:275380
leucine-rich repeat 341..364 CDD:275380
leucine-rich repeat 389..410 CDD:275380
leucine-rich repeat 411..430 CDD:275380
leucine-rich repeat 627..650 CDD:275380
leucine-rich repeat 651..669 CDD:275380
leucine-rich repeat 697..719 CDD:275380
LRR_8 719..777 CDD:290566
leucine-rich repeat 720..743 CDD:275380
leucine-rich repeat 744..766 CDD:275380
PIRL5NP_179336.1 LRR_RI 202..451 CDD:238064
leucine-rich repeat 206..231 CDD:275380
LRR_8 207..265 CDD:290566
leucine-rich repeat 232..254 CDD:275380
LRR_8 254..334 CDD:290566
leucine-rich repeat 255..300 CDD:275380
leucine-rich repeat 301..323 CDD:275380
leucine-rich repeat 324..346 CDD:275380
LRR_8 345..403 CDD:290566
leucine-rich repeat 347..369 CDD:275380
leucine-rich repeat 370..392 CDD:275380
leucine-rich repeat 393..440 CDD:275380
LRR_8 414..474 CDD:290566
leucine-rich repeat 441..463 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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