DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment f-cup and LRRC8E

DIOPT Version :9

Sequence 1:NP_001262544.1 Gene:f-cup / 41677 FlyBaseID:FBgn0028487 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001255213.1 Gene:LRRC8E / 80131 HGNCID:26272 Length:796 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
f-cupNP_001262544.1 leucine-rich repeat 111..140 CDD:275380
LRR_RI 155..>377 CDD:238064
leucine-rich repeat 158..180 CDD:275380
LRR_8 180..235 CDD:290566
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..226 CDD:275380
LRR_8 225..283 CDD:290566
leucine-rich repeat 227..249 CDD:275380
leucine-rich repeat 250..272 CDD:275380
LRR_8 272..329 CDD:290566
leucine-rich repeat 273..295 CDD:275380
leucine-rich repeat 296..318 CDD:275380
LRR_8 317..375 CDD:290566
leucine-rich repeat 319..340 CDD:275380
leucine-rich repeat 341..364 CDD:275380
leucine-rich repeat 389..410 CDD:275380
leucine-rich repeat 411..430 CDD:275380
leucine-rich repeat 627..650 CDD:275380
leucine-rich repeat 651..669 CDD:275380
leucine-rich repeat 697..719 CDD:275380
LRR_8 719..777 CDD:290566
leucine-rich repeat 720..743 CDD:275380
leucine-rich repeat 744..766 CDD:275380
LRRC8ENP_001255213.1 Pannexin_like 1..331 CDD:289311
leucine-rich repeat 486..508 CDD:275380
LRR 1 508..529
leucine-rich repeat 509..527 CDD:275380
LRR_RI 520..760 CDD:238064
LRR 2 536..557
leucine-rich repeat 537..559 CDD:275380
LRR 3 559..579
leucine-rich repeat 560..583 CDD:275380
LRR 4 583..604
LRR_8 584..642 CDD:290566
leucine-rich repeat 584..606 CDD:275380
LRR 5 606..627
leucine-rich repeat 607..631 CDD:275380
LRR_8 630..688 CDD:290566
LRR 6 631..652
leucine-rich repeat 632..654 CDD:275380
LRR 7 654..675
leucine-rich repeat 655..677 CDD:275380
LRR_8 676..734 CDD:290566
LRR 8 677..698
leucine-rich repeat 678..700 CDD:275380
LRR 9 700..721
leucine-rich repeat 701..723 CDD:275380
LRR 10 723..744
leucine-rich repeat 724..746 CDD:275380
LRR 11 746..767
leucine-rich repeat 747..767 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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