DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment f-cup and LRRC8D

DIOPT Version :9

Sequence 1:NP_001262544.1 Gene:f-cup / 41677 FlyBaseID:FBgn0028487 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001127951.1 Gene:LRRC8D / 55144 HGNCID:16992 Length:858 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
f-cupNP_001262544.1 leucine-rich repeat 111..140 CDD:275380
LRR_RI 155..>377 CDD:238064
leucine-rich repeat 158..180 CDD:275380
LRR_8 180..235 CDD:290566
leucine-rich repeat 181..203 CDD:275380
leucine-rich repeat 204..226 CDD:275380
LRR_8 225..283 CDD:290566
leucine-rich repeat 227..249 CDD:275380
leucine-rich repeat 250..272 CDD:275380
LRR_8 272..329 CDD:290566
leucine-rich repeat 273..295 CDD:275380
leucine-rich repeat 296..318 CDD:275380
LRR_8 317..375 CDD:290566
leucine-rich repeat 319..340 CDD:275380
leucine-rich repeat 341..364 CDD:275380
leucine-rich repeat 389..410 CDD:275380
leucine-rich repeat 411..430 CDD:275380
leucine-rich repeat 627..650 CDD:275380
leucine-rich repeat 651..669 CDD:275380
leucine-rich repeat 697..719 CDD:275380
LRR_8 719..777 CDD:290566
leucine-rich repeat 720..743 CDD:275380
leucine-rich repeat 744..766 CDD:275380
LRRC8DNP_001127951.1 Pannexin_like 1..384 CDD:289311
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..251
LRR 1 514..534
leucine-rich repeat 515..536 CDD:275378
LRR 2 538..559
LRR 3 561..582
leucine-rich repeat 562..589 CDD:275380
LRR_RI 582..816 CDD:238064
LRR 4 589..609
leucine-rich repeat 590..615 CDD:275380
LRR 5 612..632
LRR_8 636..695 CDD:290566
LRR 6 636..657
leucine-rich repeat 637..659 CDD:275380
LRR 7 659..680
leucine-rich repeat 660..684 CDD:275380
LRR_8 683..741 CDD:290566
LRR 8 684..705
leucine-rich repeat 685..707 CDD:275380
LRR 9 707..728
leucine-rich repeat 708..730 CDD:275380
LRR 10 730..751
leucine-rich repeat 731..753 CDD:275380
LRR_8 753..808 CDD:290566
LRR 11 753..774
leucine-rich repeat 754..776 CDD:275380
LRR 12 776..797
leucine-rich repeat 777..799 CDD:275380
LRR 13 799..820
leucine-rich repeat 800..820 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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