Protein Alignment f-cup and Lrrc30

DIOPT Version :9

• Sequence 1: NP_001262544.1
• Gene: f-cup / 41677
• FlyBaseID: FBgn0028487
• Length: 802
• Species: Drosophila melanogaster
• Sequence 2: XP_237538.1
• Gene: Lrrc30 / 301711
• RGDID: 1563832
• Length: 300
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
f-cup	NP_001262544.1	leucine-rich repeat	111..140	CDD:275380
		LRR_RI	155..>377	CDD:238064
		leucine-rich repeat	158..180	CDD:275380
		LRR_8	180..235	CDD:290566
		leucine-rich repeat	181..203	CDD:275380
		leucine-rich repeat	204..226	CDD:275380
		LRR_8	225..283	CDD:290566
		leucine-rich repeat	227..249	CDD:275380
		leucine-rich repeat	250..272	CDD:275380
		LRR_8	272..329	CDD:290566
		leucine-rich repeat	273..295	CDD:275380
		leucine-rich repeat	296..318	CDD:275380
		LRR_8	317..375	CDD:290566
		leucine-rich repeat	319..340	CDD:275380
		leucine-rich repeat	341..364	CDD:275380
		leucine-rich repeat	389..410	CDD:275380
		leucine-rich repeat	411..430	CDD:275380
		leucine-rich repeat	627..650	CDD:275380
		leucine-rich repeat	651..669	CDD:275380
		leucine-rich repeat	697..719	CDD:275380
		LRR_8	719..777	CDD:290566
		leucine-rich repeat	720..743	CDD:275380
		leucine-rich repeat	744..766	CDD:275380
Lrrc30	XP_237538.1	PRK15370	<59..>227	CDD:185268
		leucine-rich repeat	72..94	CDD:275380
		leucine-rich repeat	95..117	CDD:275380
		leucine-rich repeat	118..140	CDD:275380
		leucine-rich repeat	141..163	CDD:275380
		leucine-rich repeat	164..186	CDD:275380
		leucine-rich repeat	187..209	CDD:275380
		leucine-rich repeat	210..228	CDD:275380
		leucine-rich repeat	256..285	CDD:275380

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000