DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flfl and smek1

DIOPT Version :9

Sequence 1:NP_731849.2 Gene:flfl / 41675 FlyBaseID:FBgn0024555 Length:980 Species:Drosophila melanogaster
Sequence 2:NP_001038274.1 Gene:smek1 / 558578 ZFINID:ZDB-GENE-030131-3958 Length:818 Species:Danio rerio


Alignment Length:983 Identity:456/983 - (46%)
Similarity:629/983 - (63%) Gaps:176/983 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TDTRRRVKLYALNAERQWDDRGTGHVSSTYVERLKGISLLVRAESDGSLLLESKIQPDTAYQKQQ 67
            ||||||||:|.||.:|||||||||||||.|||||||:||||||||||||||||||.|:|||||||
Zfish     2 TDTRRRVKVYTLNEDRQWDDRGTGHVSSAYVERLKGMSLLVRAESDGSLLLESKINPNTAYQKQQ 66

  Fly    68 DTLIVWSEGDNFDLALSFQEKAGCDEIWEKICQVQGKDPSVEITQDIVEESEDERFEDMSDTAPP 132
            ||||||||.:|:|||||||||||||||||||||||||||||:|||::::|||:|||:|||  :|.
Zfish    67 DTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQELIDESEEERFDDMS--SPG 129

  Fly   133 IELPPCELSRLEDISETIQSCLSTPLRKEKLSMALESESYIKKLLNLFHVCEDLDNTEGLHHLFE 197
            :|||||||||||:::|.:.|.|.:|||:|||::|||:|.||:|||.||.|||||:|.||||||::
Zfish   130 LELPPCELSRLEEVAELVASSLPSPLRREKLALALENEGYIRKLLELFRVCEDLENREGLHHLYD 194

  Fly   198 IFKNIFLLNKNALFEIMFADDTIFDVVGCLEYDPSVSQPKKHRQYLKQLAKFREAVPIKNLDLLA 262
            |.|.|||||:.||||:||:::.|.||:||||:|||:.||::||::|...|:|:|.:||.:.:|..
Zfish   195 IIKGIFLLNRTALFEVMFSEECIMDVIGCLEFDPSLPQPRRHREFLTTTARFKEVIPISDPELRQ 259

  Fly   263 KIHQTFRVQYIQDIILPTPSVFVEDNMLNTLSSFIFFNKVEIVTMIQDDERYLLDVFAVLTDPTT 327
            |||||:|||||||::||||||| |:|||:||.|||||||||||.|:||||::|.::||.|||..|
Zfish   260 KIHQTYRVQYIQDMVLPTPSVF-EENMLSTLHSFIFFNKVEIVGMLQDDEKFLTELFAQLTDEAT 323

  Fly   328 GDAKRRDTVLFLKEFCNYAQNLQPQGKDSFYKTLTCLGILQALELTLVMNDKKTKSASIDILTAI 392
            .|.||.:.|.||||||.::|.||||.:|:|:|||:.:|||||||:.|.|:|.:.:.|:.||.:.:
Zfish   324 DDDKRHELVNFLKEFCAFSQTLQPQNRDAFFKTLSNMGILQALEVILGMDDVQVRGAATDIFSYL 388

  Fly   393 VEFSPLVVRNYTLNQANRPEVERMLLNIAIEQMLNDSEPELGIAVQLMGIVKILLEPENML---- 453
            ||::|.:||.:.:.::.:.:.:.:|:|:.||.|:.|::||||.||||||:::.|::|||||    
Zfish   389 VEYNPSMVREFVMQESQQNDDDILLINLIIEHMICDTDPELGGAVQLMGLLRTLVDPENMLATAN 453

  Fly   454 -TEKGDFLNFFYKYSVQTLVAPVILNTIGDRPQNEDYQTAQLLGIVLDILSFCVEHHSYHIKNFL 517
             |||.:||:||||:.:..|.||::.||..::|..:|:||.|||.:::::|:||||||:|||||::
Zfish   454 KTEKTEFLSFFYKHCMHVLSAPLLANTTEEKPSKDDFQTCQLLALIVELLTFCVEHHTYHIKNYI 518

  Fly   518 LQKDLLKRILVLMKSTHTFLVLGALRLLRKIIALKDEFYNRHIVKCNLFAPVVDAFIRNNGRYNL 582
            :.||:|:|:|||..|.|.||.|.|||.:||||.||||||||:|::..||.|||.||:.|..||||
Zfish   519 INKDILRRVLVLTASQHAFLALCALRFMRKIIGLKDEFYNRYIMRNFLFEPVVKAFLNNGSRYNL 583

  Fly   583 LESAILELFEFIKLEDIRTLCVYFVENFSKIFDEIEYVQTFKYLKNRYDQYQDRLKDRDKMENRT 647
            :.|||:|:||::::||:::|..:.:||:.|..::::||||||.||.||:|.::| :|..|:::..
Zfish   584 INSAIIEMFEYVRVEDVKSLTAHIIENYWKGLEDVDYVQTFKGLKLRYEQQRER-QDNPKLDSMR 647

  Fly   648 DGGLPIIRSGGRFRRDQRQMEEEEEMWFNEEDDFTEEIDTYNNVMKSVSEKNGPQTQNQQKSSPP 712
            .    |:|: .|||||.|.:|:|||||||.:::..|:                            
Zfish   648 S----ILRN-HRFRRDARTLEDEEEMWFNTDEEDLED---------------------------- 679

  Fly   713 HSTSPHSGLLGSLSTTASSTATSATSGAPVASGSSSPEAISADEQTQAAVHLAAAALQHHQQQQQ 777
                                      |..|...|   :.:..||.....:             .:
Zfish   680 --------------------------GEAVVPPS---DKMKNDEDLMDPI-------------SK 702

  Fly   778 QQQQNPFQQQTQPEIAELQQQLSSVEAPQSQELELSQSAAASASPTSSSSSLEASTSSSSASSSS 842
            ..::...:...:.|:...:..||..::| |.:|..|.|..||.|            |..:||...
Zfish   703 FMERKKLKDSEEKEVLTGKASLSGRQSP-SFKLSFSSSPKASLS------------SPPTASLHP 754

  Fly   843 SSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAAAATNSSPSISPAPAVSSPD 907
            .|..|.|.||:.|.:|                                                 
Zfish   755 GSPGSPSSPGTGARSS------------------------------------------------- 770

  Fly   908 IENADAQLPPSDDASSPASGEQDANSTEGTSSEADKTTAKKGLVDYESDSGEDDYEEDEYS--EG 970
                    |||           .|.:|:|         ...|||||..|..||:.|||..|  |.
Zfish   771 --------PPS-----------AAVTTKG---------GLVGLVDYPDDDEEDEDEEDADSKEES 807

  Fly   971 PQAQKRAR 978
            |...|:::
Zfish   808 PPLSKKSK 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flflNP_731849.2 PH-like 8..>66 CDD:302622 49/57 (86%)
SMK-1 169..361 CDD:282636 120/191 (63%)
smek1NP_001038274.1 PH-like 7..>65 CDD:302622 49/57 (86%)
SMK-1 166..357 CDD:282636 120/191 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 670..818 50/306 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594437
Domainoid 1 1.000 332 1.000 Domainoid score I1114
eggNOG 1 0.900 - - E1_KOG2175
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 861 1.000 Inparanoid score I408
OMA 1 1.010 - - QHG54949
OrthoDB 1 1.010 - - D261288at33208
OrthoFinder 1 1.000 - - FOG0001376
OrthoInspector 1 1.000 - - oto39005
orthoMCL 1 0.900 - - OOG6_101106
Panther 1 1.100 - - O PTHR23318
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3995
SonicParanoid 1 1.000 - - X869
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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