DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flfl and smk-1

DIOPT Version :9

Sequence 1:NP_731849.2 Gene:flfl / 41675 FlyBaseID:FBgn0024555 Length:980 Species:Drosophila melanogaster
Sequence 2:NP_001023909.2 Gene:smk-1 / 179243 WormBaseID:WBGene00018285 Length:1085 Species:Caenorhabditis elegans


Alignment Length:989 Identity:332/989 - (33%)
Similarity:533/989 - (53%) Gaps:158/989 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DTRRRVKLYALNAERQWDDRGTGHVSSTYVERLKG-------ISLLVRAESDGSLLLESKIQPDT 61
            |...|||||.|..:|.|:|||||||.:..:....|       ..:|||.|.....:|||:||.||
 Worm   171 DATNRVKLYVLCDQRIWEDRGTGHVVTHQLSAEDGAPSNAGNTMVLVRLEGQNKNMLESRIQMDT 235

  Fly    62 AYQKQQDTLIVWSEGDNFDLALSFQEKAGCDEIWEKICQVQGKDP-SVEITQDIVEESEDERFED 125
            .|||||:|||||||.|..|||||||||:||:|:|:|||:|||:|| ..:.|.|   :.:|....:
 Worm   236 VYQKQQETLIVWSETDVMDLALSFQEKSGCEELWQKICEVQGRDPGDPDATFD---DGDDSDVGE 297

  Fly   126 MSDTAPPIELPPCELSRLEDISETIQSCLSTPLRKEKLSMALESESYIKKLLNLFHVCEDLDNTE 190
            |..:|..::|||.|:.||.::...:...|:|...:||:::|:|:::.:.||..:|.:|||:::||
 Worm   298 MPSSASRLQLPPIEIGRLGELDALLHMHLTTNSAREKMTLAIENDNVVTKLCEVFRMCEDIEHTE 362

  Fly   191 GLHHLFEIFKNIFLLNKNALFEIMFADDTIFDVVGCLEYDPSVSQPKKHRQYLKQLAKFREAVPI 255
            ||...:.|.||:|:||:|.:.|::..|:.|.||:|..|:||:...|:|||.::.:.|||||.:.|
 Worm   363 GLRTFYSIVKNLFMLNRNTVIEMLLDDNNIKDVIGMFEFDPAYKHPRKHRDFVYKKAKFREVLNI 427

  Fly   256 KNLDLLAKIHQTFRVQYIQDIILPTPSVFVEDNMLNTLSSFIFFNKVEIVTMIQDDERYLLDVFA 320
            ...:|..|||:.:|.|||||..||:..:| |:|:|:||||.:||.:|:|||::|.|::.:.::|.
 Worm   428 SCDELRDKIHRLYRAQYIQDACLPSLGLF-EENLLSTLSSHVFFCRVDIVTLLQKDKKAMSELFG 491

  Fly   321 VLTDPTTGDAKRRDTVLFLKEFCNYAQNLQPQG----KDSFYK----TLTCLGILQALELTLVMN 377
            .|....|...:|||..|||||..:.:.::...|    |::|:|    .:....||.:||......
 Worm   492 QLISEETDVIRRRDLALFLKEMISLSTSIPSNGPAATKETFFKLQLQNMFNSEILDSLEPCFKSP 556

  Fly   378 DKKTKSASIDILTAIVEFSPLVVRNYTLNQA-NRPEVERMLLNIAIEQMLNDSEPELGIAVQLMG 441
            |.:|::..:|:|..:|:.:..::|::.|.|: .:.:.|.:|||:.|..:|.|.:..|....:::.
 Worm   557 DHETRAVMVDVLRTMVDANAQMIRDFLLKQSKTKDKNEDVLLNMMIRHLLTDIDVHLTSGSEIVL 621

  Fly   442 IVKILLEPENMLT---EKGDFLNFFYKYSVQTLVAPVILNTIGDRPQNEDYQTAQLLGIVLDILS 503
            |:|.||:||||.|   |:.|||..||....::|:.|::.|..|...:.:||..|....::|.:|:
 Worm   622 IMKTLLDPENMTTVKSERSDFLQLFYNRCYESLLKPILENVSGGNIKKDDYMIANRQSVILRLLT 686

  Fly   504 FCVEHHSYHIKNFLLQKDLLKRILVLMKSTHTFLVLGALRLLRKIIALKDEFYNRHIVKCNLFAP 568
            |||||||:.::...:..||:.::|||:||.|:||||.||:||::::.:||:.|.|:|||..:..|
 Worm   687 FCVEHHSFSMRQRCVSNDLMNKVLVLLKSKHSFLVLSALKLLQRVVTVKDDKYIRYIVKEKVLDP 751

  Fly   569 VVDAFIRNNGRYNLLESAILELFEFIKLEDIRTLCVYFVENFSKIFDEIEYVQTFKYLKNRYDQY 633
            |::.|.:|..|||::.|::|.||||::.||:|.|..|.|||..::.|.:.||:|||.:|.||||:
 Worm   752 VMECFRKNGNRYNIINSSVLHLFEFVRSEDVRPLIKYVVENHMEVVDSVNYVKTFKEIKIRYDQH 816

  Fly   634 QDRLKDRDKMENRT-DGGLPIIRSGGRFRRDQRQMEEEEEMWFNEEDDFTEEIDTYNNVMKSVSE 697
            :||   .:.|..|: |..|...||   ||:|:     .|:.||:|::|.  |:.|   :::|: |
 Worm   817 RDR---EETMSVRSEDNSLASPRS---FRKDR-----NEDQWFDEDEDL--EVGT---MLESI-E 864

  Fly   698 KNGPQTQNQQKSSPPHSTSPHSGLLGSLSTTASSTATSATSGAPVASGSSSPEAISADEQTQAAV 762
            |:                               |.|.|                           
 Worm   865 KD-------------------------------SVAVS--------------------------- 871

  Fly   763 HLAAAALQHHQQQQQQQQQNPFQQQTQPEIAELQQQLSSVEAPQSQELELSQSAAASASPTSSSS 827
                      .::::..|:....:...|.:.:.:......|||     .....:||..:.|....
 Worm   872 ----------PKKEEAGQRKTGMEPMFPSLLKRKNAFDDDEAP-----VFGGGSAAVINNTEKKI 921

  Fly   828 SLEAST--SSSSASSSSSSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAAAA 890
            .::.::  |.|...|.:||..:||.||.|..    |..|                        ::
 Worm   922 VIKVNSDRSPSRTPSPASSPRASSSPGPSRD----DEVT------------------------SS 958

  Fly   891 TNSSPSISPAPAVSS-PDIENAD--AQLPPSDDA---SSPASGEQDANSTEGTSSEADKTTAKKG 949
            .|:..| ||.|.|.| .|.:.:|  ...|||.||   ||..|.|::.:|.:|...::.:..    
 Worm   959 QNNKES-SPTPTVKSLVDYDESDDSDDDPPSPDAVPSSSTGSPEKEGDSADGKKGDSPEYN---- 1018

  Fly   950 LVDYESDSGEDDYE 963
              |..|.|.|:.::
 Worm  1019 --DVSSTSNEEKFD 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flflNP_731849.2 PH-like 8..>66 CDD:302622 29/64 (45%)
SMK-1 169..361 CDD:282636 79/199 (40%)
smk-1NP_001023909.2 SMK-1 341..534 CDD:368128 78/193 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166130
Domainoid 1 1.000 235 1.000 Domainoid score I1332
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I663
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54949
OrthoDB 1 1.010 - - D261288at33208
OrthoFinder 1 1.000 - - FOG0001376
OrthoInspector 1 1.000 - - oto17542
orthoMCL 1 0.900 - - OOG6_101106
Panther 1 1.100 - - LDO PTHR23318
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X869
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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