DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment omd and ints-5

DIOPT Version :9

Sequence 1:NP_001262542.1 Gene:omd / 41674 FlyBaseID:FBgn0038168 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_507625.2 Gene:ints-5 / 180207 WormBaseID:WBGene00013075 Length:1057 Species:Caenorhabditis elegans


Alignment Length:1120 Identity:198/1120 - (17%)
Similarity:367/1120 - (32%) Gaps:344/1120 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LIKLALGFLEELPATRDIVFEYFALLAEISVQLYVSPEMADPKTGMPVSQVKLAGNRQQQQRAPE 96
            |:|.|:......||:|..||.|..||...|...:.:.:    :....||.:.:. |....:....
 Worm    61 LVKPAIDVFRAFPASRPTVFHYTGLLIHESAHHWFNAQ----ENVQQVSNITIV-NEATCELLDF 120

  Fly    97 YEAF-------NLVKTALQSLVWKGPPAWSPLIANWSLELVAKLSDKYTQRRMTITASCN----- 149
            |..|       :.::..||                |..|:.::||.|...|...:.|..|     
 Worm   121 YMKFFAETDGNSGLEECLQ----------------WLCEICSELSSKNAGRPAMLPAQQNAEILQ 169

  Fly   150 YWLECSAMHGLMTLINSCFRKLTQPEEEACVEIMLNAFHRFPMTFDWIVARLGGCFPYKIIMQIL 214
            .|.....:..|::|::.|...........|:..:..| .|....|.||...:.......||..:|
 Worm   170 IWKSNDVIDKLLSLLSICVTSSLAQNSVGCMRALFEA-SRHGQHFSWIWLHIATLLQGSIITHLL 233

  Fly   215 QCGIKRF------------------------VDDYRCHLDSEAGILDYMTSCHEQHLRAAFREML 255
            :.|.::|                        ..:|.....:.:.:.:::.......|:.|..:::
 Worm   234 ESGAEQFRT
YVIEISSRKTVQTGGPAVLNIIQTEYEHKFRAISDVFNFLMQKRNPELQEAVSQLI 298

  Fly   256 ------------------REGFA--------PKKPLDVAV-------VPF--------------- 272
                              |.|||        ..|.|.:.|       .||               
 Worm   299 VDSLDFKPAAGRGGGSVNRLGFAFFFKLVTCSLKTLQILVNTNCHLITPFNVIRAIRQVQTVEKS 363

  Fly   273 -LLITTNYSDTILQSLVNVLVE--------IYTEDMCEVIVQKAPLWLSN---------KMFAGM 319
             :|....:||.|.|     :||        |..|.:.|::...|.....|         |:.|..
 Worm   364 LILPAITFSDFIKQ-----IVEDVDPITHGIIFELLVELVYNPAVFEGENLPEFRESNEKIRADC 423

  Fly   320 QPTLNNAVLRL----NERG---ATLLLTAAKM---AEKYVWCQDFLDNSMQELEQWVLNQRNFPL 374
            .|.|:..:.|:    :..|   .:.|..|.::   .||..:..|...|....|:......|:...
 Worm   424 FPVLDVMISRIIRIAHSAGGYKCSSLHPAIQLYSSGEKLQFIIDSAKNCTDNLQMTSSIIRHLHA 488

  Fly   375 LADLAYEETK--YMLWKSCLSTNLFEQQTAVRLLLVVSSQHPNIYYQTISQLLKKSYAQNPNGIG 437
            :: :|::|:|  .:..:..::|:..:.:....|:..:|:..|  :|   .|:|.|.:|:      
 Worm   489 IS-IAFDESKAAEIALRFLMTTDFGDSKKLEILMAYLSATVP--FY---PQMLAKMWAE------ 541

  Fly   438 ALIRLLGGQSGMVNFPGFTPGFKMVLEDITLDVQVNNRLPVPPGTPTEAFNTFSNLNILARMHKS 502
                 .||...::.| .|.|...:..:.|.:.:.:.:.           |.|..:..:.......
 Worm   542 -----FGGLRELIAF-SFDPESPLKRDSIHVHMNLLHN-----------FRTIFDWELHTAPAAP 589

  Fly   503 KNVAPYIK---AQHLNQALNECLPKILQIFDC-------------TVNKLVLRI----------D 541
            ||...:.|   .||:...||..|...::|  |             |:.:||.::          .
 Worm   590 KNSYGFWKLYPGQHIGSVLNTILTNTVKI--CWELQEANKLSEVITIYRLVTKLIEGVCQSNSTG 652

  Fly   542 RDAAERIADKFRAQQSKNSN--------------------NNNELCNGKDYGKRTKLEPGEDKVD 586
            |.||:        |..|||.                    .|..|..|:|.       |....:.
 Worm   653 RTAAD--------QNVKNSRKMVITLSQMYKLMAQFAILLKNALLLVGRDL-------PDGIVIF 702

  Fly   587 DEDATRMRLAHLIVDLLNNIEAGSRTTVLRTPLVLKLATLSVKYFFVG--LTEKTVIRRAAASHR 649
            :|    :|...|.....|:::          |.:.:.:.:.|:.|...  ...|.:.......|.
 Worm   703 EE----LRAQCLYFLFGNHLD----------PQLSRFSPVFVQIFVQSCYADAKKLFHEPIIDHG 753

  Fly   650 SYTLLQRQCSARKIARTVCLRELVERALFYHGHLLGQLEVYQLDELEIPEHEHLILQNLHTSSGA 714
            ...||.   ..:.:.|.:.::|||:          |...:.||..|::                .
 Worm   754 LEQLLD---ETQGLGRILDMQELVD----------GPSVIGQLKSLKM----------------R 789

  Fly   715 NSNRSVLHSGIIGRGLRPVL--PPSERNCDAEKQA-LYLKALNACCADLEKPNNVEGYSLVSLLL 776
            :|..::||:|.:.|  |.:|  |.:..|.:|.::. :.|.|:...|...:....:.....::..|
 Worm   790 DSALAMLHTGQLKR--RRLLEDPVTVENENATQRVYVVLDAIRLMCTSGKLEIRIGCSKHLAQAL 852

  Fly   777 VELVSTDVMYNGLPFPDEEFTRVTMERDMLIRRAFINSPVLWAVLGLIAGHRPALCYSSVLLRAL 841
            ::.:..|.:.:.:.|.:.:.....:.|.:.|.:....||....:|.::|..| :..|...::::.
 Worm   853 LQTICKDSLMSDMRFDEWDSEAEFIHRHVEIAQRIARSPFSDGILRILAETR-SFAYCLPIMKSK 916

  Fly   842 CATCLHHWRGKNVNRFQPTAANDELMLCTKKMLQ---LLAMSQLIPP----PLTNLHLIIEHFES 899
            .|..|:     :..:|....|..|   .|::.||   .||....|.|    |:.:|    |.|.:
 Worm   917 LAVLLN-----DTEKFPEHVAISE---PTRQKLQNWVFLAQKGGILPGRLAPICDL----EQFST 969

  Fly   900 A-EIALLLRECIWNYLKDHVPSPALFHVDNNGLHWRNTNTQLAKVPPQYVDPLRHLMQRKLSTLG 963
            . |..|:|.| ||.:.                                   .:|.|....:.|  
 Worm   970 CHETHLMLVE-IWRFF-----------------------------------VVRQLNTATIDT-- 996

  Fly   964 PHYHQMFIMGELMEG 978
              ||...:.|::.||
 Worm   997 --YHMEILRGDVDEG 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
omdNP_001262542.1 INTS5_N 4..221 CDD:291503 41/200 (21%)
INTS5_C 229..962 CDD:291504 149/869 (17%)
ints-5NP_507625.2 INTS5_N 43..242 CDD:373329 42/202 (21%)
INTS5_C <798..984 CDD:373330 43/201 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163601
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46681
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108361
Panther 1 1.100 - - LDO PTHR31697
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

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