DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and SIP1

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_568878.1 Gene:SIP1 / 835951 AraportID:AT5G58380 Length:479 Species:Arabidopsis thaliana


Alignment Length:418 Identity:125/418 - (29%)
Similarity:208/418 - (49%) Gaps:56/418 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 QKKKSIKMVGKYIMGDVLGEGSYGKV---KEAMNSENLCRLAVKILTKRKLRRIPNGEQNVTREI 222
            :.|.|: :..||.:|.:||:|::.||   :..:.:::   :|:|::.|.|:.::...|| :.|||
plant     2 ENKPSV-LTDKYDVGRLLGQGTFAKVYYGRSILTNQS---VAIKMIDKEKVMKVGLIEQ-IKREI 61

  Fly   223 ALLKQLKHRHVVELVDVLYNEEKQKMYLVMEYCVGGLQEMIDYQPDKRMPLFQAHGYFKQLVDGL 287
            ::::..:|.:||||.:|:  ..|.::|.|||||.||  |:.:.....::....|..||.||::.:
plant    62 SVMRIARHPNVVELYEVM--ATKTRIYFVMEYCKGG--ELFNKVAKGKLRDDVAWKYFYQLINAV 122

  Fly   288 EYLHSCRVIHKDIKPGNLLLSLDQTLKISDFGVAEQLDLFAPDDTCTTGQGSPAFQPPEIANGHE 352
            ::.||..|.|:||||.||||..::.||:||||::...|....|....|..|:||:..||:.| .:
plant   123 DFCHSREVYHRDIKPENLLLDDNENLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVIN-RK 186

  Fly   353 TFAGFKVDIWSSGVTLYNLATGQYPFEGDNIYRLLENIGRGQWEAPAWLYEMDADFANLILGMLQ 417
            .:.|.|.||||.||.|:.|..|..||...|:..:...||:..::||:|   ...:...|:..||.
plant   187 GYDGTKADIWSCGVVLFVLLAGYLPFHDSNLMEMYRKIGKADFKAPSW---FAPEVRRLLCKMLD 248

  Fly   418 ADPSKRLSLQEIRHDTWFRSAPVKTGPPIPIPPLKGDKYRNSTVIPYLEAYHYGTQEEDVYFTEH 482
            .:|..|:::..||..:|||..       :.:...|.:|  ....|..:||...||.|.....:|:
plant   249 PNPETRITIARIRESSWFRKG-------LHMKQKKMEK--RVKEINSVEAGTAGTNENGAGPSEN 304

  Fly   483 DVNQELARQAAAAASEIRAKQSAAALAACHTYEPPSTS-----AAAASNSL----GNGSREEA-- 536
                      .|..||    .........||.||.:.:     |.:|...|    |:.::.|:  
plant   305 ----------GAGPSE----NGDRVTEENHTDEPTNLNAFDLIALSAGFDLAGLFGDDNKRESRF 355

  Fly   537 ----PVKKKGSALKRRAKKLTSCISVRK 560
                |.....|.|:..|::|.  :|:||
plant   356 TSQKPASVIISKLEEVAQRLK--LSIRK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 90/265 (34%)
STKc_LKB1 178..435 CDD:271021 88/259 (34%)
SIP1NP_568878.1 PKc_like 11..265 CDD:419665 91/265 (34%)
CIPK_C 328..440 CDD:213380 13/56 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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