DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and CIPK26

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_850861.2 Gene:CIPK26 / 832246 AraportID:AT5G21326 Length:439 Species:Arabidopsis thaliana


Alignment Length:393 Identity:124/393 - (31%)
Similarity:187/393 - (47%) Gaps:58/393 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 KKKSIKMVGKYIMGDVLGEGSYGKVKEAMNSENLCRLAVKILTKRKLRRIPNGEQNVTREIALLK 226
            :.|..:.||||.:|..||:|::.||:.|:|:|...|:|:|||.|.|:.:....|| :.|||..:|
plant     3 RPKVQRRVGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQ-IRREICTMK 66

  Fly   227 QLKHRHVVELVDVLYNEEKQKMYLVMEYCVGGLQEMID-YQPDKRMPLFQAHGYFKQLVDGLEYL 290
            .:.|.:||.|.:||  ..|.|:|:|:|:..||  |:.| ...|.|:....|..||:||::.::|.
plant    67 LINHPNVVRLYEVL--ASKTKIYIVLEFGTGG--ELFDKIVHDGRLKEENARKYFQQLINAVDYC 127

  Fly   291 HSCRVIHKDIKPGNLLLSLDQTLKISDFGVAEQLDLFAPDDTCTTGQGSPAFQPPEIANGHETFA 355
            ||..|.|:|:||.||||.....||:||||::........|....|..|:|.:..||:.| .:.:.
plant   128 HSRGVYHRDLKPENLLLDAQGNLKVSDFGLSALSRQVRGDGLLHTACGTPNYAAPEVLN-DQGYD 191

  Fly   356 GFKVDIWSSGVTLYNLATGQYPFEGDNIYRLLENIGRGQWEAPAWLYEMDADFANLILGMLQADP 420
            |...|:||.||.|:.|..|..|||..|:..|.:.|..|::..|.||   .....|||:.:|..:|
plant   192 GATADLWSCGVILFVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWL---SPGAKNLIVRILDPNP 253

  Fly   421 SKRLSLQEIRHDTWFRSAPVKTGPPIPIPPLKGDKYRNSTVIPYLEAYHYGTQEEDVYF---TEH 482
            ..|:::.|:..|.||:                    :|.....:.|.......:.|..|   .||
plant   254 MTRITIPEVLGDAWFK--------------------KNYKPAVFEEKEEANLDDVDAVFKDSEEH 298

  Fly   483 DVNQELARQAAAAASEIRAKQSAAALAACHTYEPPSTSAAAASNSLGNGSREEAPVKK------K 541
            .|.::...|.                .:.:.:|..|.|.|.   .|||...||...|:      |
plant   299 HVTEKKEEQP----------------TSMNAFELISMSRAL---DLGNLFEEEEGFKRETRFAAK 344

  Fly   542 GSA 544
            |:|
plant   345 GAA 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 97/263 (37%)
STKc_LKB1 178..435 CDD:271021 95/257 (37%)
CIPK26NP_850861.2 STKc_SnRK3 12..267 CDD:271133 98/263 (37%)
CIPK_C 312..426 CDD:213380 13/39 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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