DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and CG17698

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001036633.2 Gene:CG17698 / 4379919 FlyBaseID:FBgn0040056 Length:694 Species:Drosophila melanogaster


Alignment Length:449 Identity:126/449 - (28%)
Similarity:209/449 - (46%) Gaps:82/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 KKKSIKMVGKYIMGDVLGEGSYGKVKEAMNSENLCRLAVKILTKRKLRR----IPNGEQNVT--- 219
            |..|...:.:|.:.:.:|:||||.||.|.:.|:....|:|||:|::|.|    :..|.:..|   
  Fly   273 KSGSFLQLNQYRLMEQIGQGSYGLVKLAYSEEDSTHYAMKILSKKRLLRQAGLMRRGPRKATSPL 337

  Fly   220 ----REIALLKQLKHRHVVELVDVLYNEEKQKMYLVMEYCVGGLQEMIDYQPDKRMPLFQAHGYF 280
                ||||:||:|.|.:||:||:||.:..:..:|:|.|....|  |::....|..:...:|...|
  Fly   338 DRVYREIAVLKKLDHPNVVKLVEVLDDPLEDSLYMVFELVKQG--EVLRIPTDNPLSEKRAWSIF 400

  Fly   281 KQLVDGLEY------------------LHSCRVIHKDIKPGNLLLSLDQTLKISDFGVAEQLDLF 327
            ::.:.||||                  :|..::||.|||||||||:....:||:|.||..:   |
  Fly   401 RESLLGLEYYTMLSSSAISLKRIFVYTVHHQKIIHADIKPGNLLLTEFGHVKIADLGVCNE---F 462

  Fly   328 APDD-TCTTGQ--GSPAFQPPE-IANGHETFAGFKVDIWSSGVTLYNLATGQYPFEGDNIYRLLE 388
            ..|| |.:.|.  |:|||:.|| :..|...:.|...|:|:.|.|||:|..|..||..|::..|.|
  Fly   463 LGDDATISNGSTAGTPAFRAPETLIPGQNEYCGRAADVWALGATLYSLIFGNVPFLADSVPLLYE 527

  Fly   389 NIGRGQWEAPAWLYEMDADFANLILGMLQADPSKRLSLQEIRHDTWFRSAPVKTGPPIPIPPLKG 453
            .|.:...:.|. .:::..:..:.|:.||:.:|::|:::.:::...|..|              .|
  Fly   528 KIKQDSVKFPE-NHKVTENLKSCIVQMLEKNPTQRITIPQLKTSKWVTS--------------DG 577

  Fly   454 DKYRNSTVIPYLEAYHYGTQEED---VYFTEHDVNQELARQAAAAASEIRAKQSAAALAACHTYE 515
            |             |...|:||:   |...:.|:: .:.|......:.|..|    .:...|::.
  Fly   578 D-------------YPLPTEEENCCLVQVDDEDID-SVVRSIPKLDTLILIK----TMLKKHSFG 624

  Fly   516 PPST-SAAAASNSLGNGSREEAPVK------KKGSALKRRAKKLTSCISVRKL-SHCRT 566
            .|.. ..:..|:||...||.|..::      ..||.....|::.:|...:..| .||.|
  Fly   625 NPFVKGCSGTSSSLAGCSRIERFIRAGRSNSAPGSYHMSTARQPSSDTLLPSLMEHCST 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 95/295 (32%)
STKc_LKB1 178..435 CDD:271021 94/289 (33%)
CG17698NP_001036633.2 S_TKc 283..573 CDD:214567 95/295 (32%)
STKc_CAMKK 288..574 CDD:271020 95/291 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452311
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D856506at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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