DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and CaMKI

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster


Alignment Length:414 Identity:104/414 - (25%)
Similarity:187/414 - (45%) Gaps:78/414 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 FNRVDS------QDIIYQQKKKSIKMVGKYIMGDVLGEGSYGKVKEAMNSENLC-RLAVKILTKR 206
            |.:.||      :|:  ::..|.:.:..||.:..:||.|::.:|:.|.:.::.. ..||||:.|:
  Fly     4 FGKKDSGKKAKAKDL--KELNKQVSIEEKYNLHGLLGTGAFSEVRLAESKDSPGEHFAVKIIDKK 66

  Fly   207 KLRRIPNGEQNVTREIALLK---------------QLKHRHVVELVDVLYNEEKQKMYLVMEYCV 256
            .|:   ..|:::..||.:|:               :|.|.::|:|::..  |:|.|:|||||...
  Fly    67 ALK---GKEESLENEIRVLRRFSANHFDGKCLNGTRLTHPNIVQLLETY--EDKSKVYLVMELVT 126

  Fly   257 GGLQEMIDYQPDK-RMPLFQAHGYFKQLVDGLEYLHSCRVIHKDIKPGNLLL---SLDQTLKISD 317
            ||  |:.|...:| ......|....:|:::.::|:|...|:|:|:||.|||.   ..|..:.|||
  Fly   127 GG--ELFDRIVEKGSYTEKDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISD 189

  Fly   318 FGVAEQLDLFAPDDTCTTGQGSPAFQPPEIANGHETFAGFKVDIWSSGVTLYNLATGQYPFEGDN 382
            ||:::..|    .....|..|:|.:..||:. ..:.: |..||:||.||..|.|..|..||..:|
  Fly   190 FGLSKMED----SGIMATACGTPGYVAPEVL-AQKPY-GKAVDVWSIGVISYILLCGYPPFYDEN 248

  Fly   383 IYRLLENIGRGQWE--APAWLYEMDADFANLILGMLQADPSKRLSLQEIRHDTWFRSAPVKTGPP 445
            ...|...|.:|.:|  :|.| .|:.....:.|..::.....||.:.::.....|           
  Fly   249 DANLFAQILKGDFEFDSPYW-DEISESAKHFIKNLMCVTVEKRYTCKQALGHAW----------- 301

  Fly   446 IPIPPLKGDKYRNSTVIPYLEAYHYGTQEEDVYFTEHDVNQELARQAAAAASEIRAKQ------- 503
                 :.|::..:..:        :||..|.:   :.:..:...:||..||:.||..|       
  Fly   302 -----ISGNEASSRNI--------HGTVSEQL---KKNFAKSRWKQAYYAATVIRQMQRMALNSN 350

  Fly   504 SAAALAACHTYEPPSTSAAAASNS 527
            |.|...:.::....||:..||:.:
  Fly   351 SNANFDSSNSSNQDSTTPTAATGA 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 80/284 (28%)
STKc_LKB1 178..435 CDD:271021 79/278 (28%)
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 81/287 (28%)
S_TKc 31..302 CDD:214567 81/300 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452313
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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