DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and KP78b

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001163587.1 Gene:KP78b / 41361 FlyBaseID:FBgn0026063 Length:604 Species:Drosophila melanogaster


Alignment Length:439 Identity:122/439 - (27%)
Similarity:209/439 - (47%) Gaps:69/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GKYIMGDVLGEGSYGKVKEAMNSENLCRLAVKILTKRKLRRIPNGEQNVTREIALLKQLKHRHVV 234
            |.|.:...||:|::.|||.|::......:|:|::.|..|..|  ..|.:.||:.::|:|.|.::|
  Fly    61 GVYKIIKTLGKGNFAKVKLAIHLPTGREVAIKLIDKTALNTI--ARQKLYREVNIMKKLNHPNIV 123

  Fly   235 ELVDVLYNEEKQKMYLVMEYCVGGLQEMIDY-QPDKRMPLFQAHGYFKQLVDGLEYLHSCRVIHK 298
            .|:.|:  |.::.:||||||..||  |:.:| ..:.||....|...|:|||..:||.||..::|:
  Fly   124 RLLQVI--ESERTLYLVMEYVSGG--ELFNYLVKNGRMRERDARVLFRQLVSAIEYCHSKSIVHR 184

  Fly   299 DIKPGNLLLSLDQTLKISDFGVAEQLDLFAPDDT-CTTGQGSPAFQPPEIANGHETFAGFKVDIW 362
            |:|..||||.....|||:|||.:...:..||.:| |    |||.:..||:..| :.::|.:||.|
  Fly   185 DLKAENLLLDQQMKLKIADFGFSTTFEPKAPLETFC----GSPPYAAPELFRG-KKYSGPEVDSW 244

  Fly   363 SSGVTLYNLATGQYPFEGDNIYRLLENIGRGQWEAPAWLYEMDADFANLILGMLQADPSKRLSLQ 427
            |.||.||.|.:|..||:|.|:..|.:.:.||::..|   |.:..:..:||...|..:|::|.||.
  Fly   245 SLGVVLYTLVSGSLPFDGTNLKELRDRVLRGKYRVP---YYVSIECESLIRKFLVLNPTQRTSLS 306

  Fly   428 EIRHDTW-------------FRSAPVKTGPPIPIPPLKGDKYRNSTVIPYLEAYHYGTQEEDVYF 479
            .:..|.|             |:..|:.......:..|....::...|...|:...:    :|:|.
  Fly   307 AVMADRWINMGYEQGNGLRPFQEKPMDLHDVNRLSLLSNMGHKPRDVEQSLKNQKF----DDIYC 367

  Fly   480 TEHDVNQELARQAAAAASEIRAKQSAAALAACHTYEP-----------PSTSAAAASNSLGNGSR 533
            |.  :..::|:..:.|.||    :|.::.....|..|           |:.:.:..:.:|.    
  Fly   368 TY--MLLDVAKPRSTACSE----KSGSSFRETPTAMPGSSRIPVPIAAPNVTISQVTFALD---- 422

  Fly   534 EEAPVKKKGSALKRRAKKLTS---------------CISVRKLSHCRTS 567
            :..|.:...::::..|.:|.:               |.|..|.::.|.|
  Fly   423 KSTPNRPAATSIRPMAPRLANALTPLPLTPPPKKYICCSASKAANPRRS 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 96/277 (35%)
STKc_LKB1 178..435 CDD:271021 95/271 (35%)
KP78bNP_001163587.1 PKc_like 63..314 CDD:304357 95/264 (36%)
S_TKc 63..314 CDD:214567 95/264 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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