DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and Stk11

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_035622.1 Gene:Stk11 / 20869 MGIID:1341870 Length:436 Species:Mus musculus


Alignment Length:427 Identity:226/427 - (52%)
Similarity:296/427 - (69%) Gaps:26/427 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 FFNRVDSQDIIYQQKKKSIKMVGKYIMGDVLGEGSYGKVKEAMNSENLCRLAVKILTKRKLRRIP 212
            |.:|:||.::|||.::|..|::|||:|||:|||||||||||.::||.|||.|||||.|:||||||
Mouse    25 FIHRIDSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIP 89

  Fly   213 NGEQNVTREIALLKQLKHRHVVELVDVLYNEEKQKMYLVMEYCVGGLQEMIDYQPDKRMPLFQAH 277
            |||.||.:||.||::|:||:|::||||||||||||||:||||||.|:|||:|..|:||.|:.|||
Mouse    90 NGEANVKKEIQLLRRLRHRNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH 154

  Fly   278 GYFKQLVDGLEYLHSCRVIHKDIKPGNLLLSLDQTLKISDFGVAEQLDLFAPDDTCTTGQGSPAF 342
            |||:||:||||||||..::|||||||||||:.:.||||||.||||.|..||.||||.|.||||||
Mouse   155 GYFRQLIDGLEYLHSQGIVHKDIKPGNLLLTTNGTLKISDLGVAEALHPFAVDDTCRTSQGSPAF 219

  Fly   343 QPPEIANGHETFAGFKVDIWSSGVTLYNLATGQYPFEGDNIYRLLENIGRGQWEAPAWLYEMDAD 407
            ||||||||.:||:||||||||:||||||:.||.|||||||||:|.||||||.:..|.   :....
Mouse   220 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGRGDFTIPC---DCGPP 281

  Fly   408 FANLILGMLQADPSKRLSLQEIRHDTWFRSAPVKTGPPIPIPPLKG--DKYRNSTVIPYLEAYH- 469
            .::|:.|||:.:|:||.|:::||..:|||.........:||||...  |::|:.||:||||..| 
Mouse   282 LSDLLRGMLEYEPAKRFSIRQIRQHSWFRKKHPLAEALVPIPPSPDTKDRWRSMTVVPYLEDLHG 346

  Fly   470 --YGTQEEDVYFTEHDV--NQELARQAAAAASEIRAKQSAAAL--AACHTYEPPSTSAAAASNSL 528
              ...:|||::..|..:  .|:..........|:.....:.:|  |.|.....|..|:       
Mouse   347 RAEEEEEEDLFDIEDGIIYTQDFTVPGQVLEEEVGQNGQSHSLPKAVCVNGTEPQLSS------- 404

  Fly   529 GNGSREEAPVKKKGSALKRRAKKLTSCISVRKLSHCR 565
                 :..|..:.|:|  ..|:|:.|...:|:||.|:
Mouse   405 -----KVKPEGRPGTA--NPARKVCSSNKIRRLSACK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 178/262 (68%)
STKc_LKB1 178..435 CDD:271021 174/256 (68%)
Stk11NP_035622.1 Sufficient for interaction with SIRT1. /evidence=ECO:0000250 45..90 33/44 (75%)
S_TKc 49..309 CDD:214567 178/262 (68%)
STKc_LKB1 55..309 CDD:271021 174/256 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..421 6/37 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849513
Domainoid 1 1.000 372 1.000 Domainoid score I895
eggNOG 1 0.900 - - E33208_3BA8D
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 435 1.000 Inparanoid score I1684
Isobase 1 0.950 - 0 Normalized mean entropy S2228
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D856506at2759
OrthoFinder 1 1.000 - - FOG0006218
OrthoInspector 1 1.000 - - oto93666
orthoMCL 1 0.900 - - OOG6_104622
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2709
SonicParanoid 1 1.000 - - X5157
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.640

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