DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkb1 and CAMKK2

DIOPT Version :9

Sequence 1:NP_001163606.1 Gene:Lkb1 / 41673 FlyBaseID:FBgn0038167 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_016874183.1 Gene:CAMKK2 / 10645 HGNCID:1470 Length:606 Species:Homo sapiens


Alignment Length:658 Identity:167/658 - (25%)
Similarity:263/658 - (39%) Gaps:203/658 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSSSRPVGGKAAGGAEAGGAGATGQMTVTTMEAQVKAAHHHHLHHPTGGGAQHKVEEEEPDPVE- 66
            |.||:|...:||...|.||.|::                                ..|...|.| 
Human     4 CVSSQPSSNRAAPQDELGGRGSS--------------------------------SSESQKPCEA 36

  Fly    67 ----DEMTVLLANKNFHYDVASDLDDDAFVEL---KEDTAQADDAGAGVGFYNPDELLLDD---- 120
                ..:::.|..::|  .|.::.:....|:|   ::...:||.          .|:.||.    
Human    37 LRGLSSLSIHLGMESF--IVVTECEPGCAVDLGLARDRPLEADG----------QEVPLDTSGSQ 89

  Fly   121 -QPHPQVTWLDDDEIETLDRV--------TLDMG------NMFFNRVDS---------------- 154
             :||     |...::...:|.        :|||.      ::.::.|.|                
Human    90 ARPH-----LSGRKLSLQERSQGGLAAGGSLDMNGRCICPSLPYSPVSSPQSSPRLPRRPTVESH 149

  Fly   155 -------QDIIYQQKKKSIK-MVGKYIMGDVL----------GEGSYGKVKEAMNSENLCRLAVK 201
                   ||.: |..:.::| .:|| :||.::          .:||||.||.|.|..:....|:|
Human   150 HVSITGMQDCV-QLNQYTLKDEIGK-LMGGIITMVKTPNASRKQGSYGVVKLAYNENDNTYYAMK 212

  Fly   202 ILTKRKL---------------RRIPNG--------EQNVTREIALLKQLKHRHVVELVDVLYNE 243
            :|:|:||               |..|.|        || |.:|||:||:|.|.:||:||:||.:.
Human   213 VLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ-VYQEIAILKKLDHPNVVKLVEVLDDP 276

  Fly   244 EKQKMYLVMEYCVGGLQEMIDYQPDKRMPLF------QAHGYFKQLVDGLEYLHSCRVIHKDIKP 302
            .:..:|:|.        |:::..|...:|..      ||..||:.|:.|:||||..::||:||||
Human   277 NEDHLYMVF--------ELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP 333

  Fly   303 GNLLLSLDQTLKISDFGVAEQLDLFAPDDTCTTGQGSPAFQPPE-IANGHETFAGFKVDIWSSGV 366
            .|||:..|..:||:||||:.:..  ..|...:...|:|||..|| ::...:.|:|..:|:|:.||
Human   334 SNLLVGEDGHIKIADFGVSNEFK--GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 396

  Fly   367 TLYNLATGQYPFEGDNIYRLLENIGRGQWEAPAWLYEMDADFANLILGMLQADPSKRLSLQEIRH 431
            |||....||.||..:.|..|...|.....|.|. ..::..|..:||..||..:|..|:.:.||:.
Human   397 TLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD-QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 460

  Fly   432 DTWFRSAPVKTGPPIPIPPLKGDKYRNSTVIPYLEAYHYGTQEEDVYFTEHDVNQELARQAAAAA 496
            ..|     |......|:|    .:..|.|::..       |:||    .|:.|     :...:.|
Human   461 HPW-----VTRHGAEPLP----SEDENCTLVEV-------TEEE----VENSV-----KHIPSLA 500

  Fly   497 SEIRAKQSAAALAACHTYEPPSTSAAAASNSLGN---GS-REEAPVKKKGSALKRRAKKLTSCIS 557
            :.|..|                  ......|.||   || |||..:...|:.|.:  |....|.|
Human   501 TVILVK------------------TMIRKRSFGNPFEGSRREERSLSAPGNLLTK--KPTRECES 545

  Fly   558 VRKLSHCR 565
            :.:|...|
Human   546 LSELKEAR 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lkb1NP_001163606.1 S_TKc 172..435 CDD:214567 100/302 (33%)
STKc_LKB1 178..435 CDD:271021 98/296 (33%)
CAMKK2XP_016874183.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D856506at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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