DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9588 and DEG13

DIOPT Version :10

Sequence 1:NP_650301.1 Gene:CG9588 / 41672 FlyBaseID:FBgn0038166 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001318714.1 Gene:DEG13 / 834054 AraportID:AT5G40560 Length:486 Species:Arabidopsis thaliana


Alignment Length:124 Identity:26/124 - (20%)
Similarity:44/124 - (35%) Gaps:45/124 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 ALDLDSDRSPGGA----------------------NITDLAPARAIVVVNLVSPDSPAERAGLCA 147
            |:..|:..:||.:                      ||..|.||.  ||.:.:   :..|:.|...
plant   180 AIQTDAAMNPGNSGGPVCIGNKVVGVAFQTLGHSNNIGCLIPAP--VVKHFI---TGVEKTGQYV 239

  Fly   148 GDAILRFGSIN----------SGNFKGDLAQIGELVRNMQSQNVQLKVKRGEQQLDLIL 196
            |     |.|:|          ..:||.:....|.|:.|:...:..|.:.:   :.|:||
plant   240 G-----FCSLNLSYQHMDAQTRSHFKMNSEMTGILIYNINQHSDALNILK---KYDVIL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9588NP_650301.1 Nas2_N 11..90 CDD:465689
RseP <130..>208 CDD:440513 16/77 (21%)
DEG13NP_001318714.1 DegQ 66..343 CDD:440035 26/124 (21%)
PDZ_3 350..471 CDD:436064
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.