DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and Kcnd3

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001257891.1 Gene:Kcnd3 / 65195 RGDID:68394 Length:655 Species:Rattus norvegicus


Alignment Length:467 Identity:93/467 - (19%)
Similarity:174/467 - (37%) Gaps:136/467 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YLLVGAAVFDALESETEKRRWEALQDAEDMIIRKYNISQEDFKVMETVVLKSESHKAGQQ----- 77
            |.::...:.|....|.:.|:.|   :||.::  ..|.|:.:.:.|.::..:....:|.:.     
  Rat   121 YGILPEIIGDCCYEEYKDRKRE---NAERLM--DDNESENNQESMPSLSFRQTMWRAFENPHTST 180

  Fly    78 ----WKFTGAFYYATTVLTTIGYGHSTP-STVGGK----------------------LFTMCY-- 113
                :.:...|:.|.:|:|.:  ..:.| .||.|.                      :||:.|  
  Rat   181 LALVFYYVTGFFIAVSVITNV--VETVPCGTVPGSKELPCGERYSVAFFCLDTACVMIFTVEYLL 243

  Fly   114 ----------------------AIVGIPLGLVMFQS-------IGERVNRLSSYVIKAVRSSLRC 149
                                  ||:...:||||..:       :..||.|:.. :.|..|.|...
  Rat   244 RLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFR-IFKFSRHSQGL 307

  Fly   150 K------RTVASEVDLICVVTTLSSLTIA-------GGAAAFSKFEGWSYFDSVYYCFITLTTIG 201
            :      ::.|||:..:....|::.:..|       .|::| |||.  |...|.:|..:|:||:|
  Rat   308 RILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSA-SKFT--SIPASFWYTIVTMTTLG 369

  Fly   202 FGDMVALQRDNALNRKPEYV---MFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRDEAQAMQ 263
            :||||           |:.:   :|..|..|.|:.::|..:.::|..|..:..:::|.|:.:|.:
  Rat   370 YGDMV-----------PKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQK 423

  Fly   264 ALQVAVKLEGDVITSNGSILSGYEGHDGQSLNGSNTSSMCSCHCICLNGNRHK-KSSNLEKNNDA 327
            ..::|........:||..:.|...|...::|..:.|..           ..|. |:::|     .
  Rat   424 KARLARIRVAKTGSSNAYLHSKRNGLLNEALELTGTPE-----------EEHMGKTTSL-----I 472

  Fly   328 ENQYKLRQSPTHIRHLLPEVVPMQDLNYDYDTQSL---------HTLADRGTMDSSYMGVDMADM 383
            |:|:.      |:.|.|.:..   .|:|..|...|         |...|....:.:.|...|.:.
  Rat   473 ESQHH------HLLHCLEKTT---GLSYLVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNY 528

  Fly   384 GDTGSMELRPHT 395
            ..|.|..|..|:
  Rat   529 PSTRSPSLSSHS 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 17/107 (16%)
Ion_trans_2 165..243 CDD:462301 24/87 (28%)
Kcnd3NP_001257891.1 BTB_POZ_KCND3 6..143 CDD:349726 5/24 (21%)
Interaction with KCNIP1. /evidence=ECO:0000250|UniProtKB:Q9UK17 6..21
Interaction with KCNIP1. /evidence=ECO:0000250|UniProtKB:Q9UK17 70..78
Ion_trans 186..412 CDD:459842 52/242 (21%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 367..372 2/4 (50%)
DUF3399 468..563 CDD:463381 18/87 (21%)
Interaction with KCNIP1 and KCNIP2. /evidence=ECO:0000250|UniProtKB:Q9UK17 470..487 6/27 (22%)
Mediates dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 474..489 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..565 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 616..647
Blue background indicates that the domain is not in the aligned region.

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