DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and Kcnk13

DIOPT Version :9

Sequence 1:NP_001262541.1 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_071629.2 Gene:Kcnk13 / 64120 RGDID:68941 Length:405 Species:Rattus norvegicus


Alignment Length:434 Identity:121/434 - (27%)
Similarity:199/434 - (45%) Gaps:86/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKQNVRTISLIVCTFTYLLVGAAVFDALESETE---KRRWEALQDAEDMIIRKYNISQEDFKVM 62
            :.:.|.|.:.|......|||.|||||.|||...|   |:|||   :......|.:|:|:|:.:..
  Rat    13 LNEDNARFLLLAGLILLYLLGGAAVFSALELAQELQAKQRWE---ERLANFSRGHNLSREELRGF 74

  Fly    63 ETVVLK--SESHKAG-------QQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGI 118
                |:  .|:.|||       .:|.||||||:..||:||||:|.:||:|.|||:|.:.|.::|.
  Rat    75 ----LRHYEEATKAGIRMDSVRPRWDFTGAFYFVGTVVTTIGFGMTTPATTGGKVFLIFYGLIGC 135

  Fly   119 PLGLVMFQSIGERVNRLSSYVIKAV-RSSLRCKRTVASE-------------------VDLICVV 163
            ...::.|....||:..:.:||::.. ...||.:.|||.:                   |..:.::
  Rat   136 ASTILFFNLFLERLITVIAYVMRTCHHQQLRRRGTVARDNGKAPRKGEADSLAGWKPSVYYVMLI 200

  Fly   164 TTLSSLTIAGGAAA-FSKFEGWSYFDSVYYCFITLTTIGFGDMVALQRDNALNRKPEYVMFALIF 227
            ..|:|:.|:.||:| ::..||||||||||:||:..:||||||:|:.|.....| :..|......|
  Rat   201 LCLASVAISCGASALYTTMEGWSYFDSVYFCFVAFSTIGFGDLVSSQNAQYEN-EGLYRFVNFFF 264

  Fly   228 ILFGLAIVAASLNLL-VLRFVTMNTEDERRDEAQAMQALQVAVKLEGDVITSNGSILSGYEGHDG 291
            ||.|:..:.:..|:: :|...|:|....:.|.....|..:..::...:|:               
  Rat   265 ILMGVCCIYSMFNVISILIKQTVNWILRKLDSGCFPQCQRGLLRSRRNVV--------------- 314

  Fly   292 QSLNGSNTSSMCSCHCICLNGN-RHKKSSNLEKNNDAENQYKLRQSPTHIRHLLPEVVPMQDLN- 354
                              :.|| |::.:.::|.:.       :.:|.|..|.|..|::.|:|.| 
  Rat   315 ------------------MPGNIRNRCNISIETDG-------VMESDTDGRRLSGEMISMKDTNK 354

  Fly   355 --YDYDTQSLHTLADRGTMDSSYMGVDMADMGDTGSMELRPHTL 396
              .....:.|..:|:.|...:|....|....|..|:..:..:.|
  Rat   355 VSLAILQKQLSEMANGGPHQTSTSSRDDEFSGGVGAFAVMNNRL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_001262541.1 Ion_trans_2 <77..132 CDD:285168 25/54 (46%)
Ion_trans_2 169..247 CDD:285168 32/79 (41%)
Kcnk13NP_071629.2 Ion_trans_2 88..150 CDD:400301 26/61 (43%)
Ion_trans_2 203..285 CDD:400301 34/82 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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