DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcnc1a

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_005168950.1 Gene:kcnc1a / 565419 ZFINID:ZDB-GENE-061220-10 Length:609 Species:Danio rerio


Alignment Length:55 Identity:17/55 - (30%)
Similarity:25/55 - (45%) Gaps:3/55 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 FYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGIPLGLVMFQSIGERVNRLSSY 138
            |::|...:||:|||...|.|..|.|.....|:.|:   |.:...:...||....|
Zfish   389 FWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGV---LTIAMPVPVIVNNFGMY 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 14/47 (30%)
Ion_trans_2 165..243 CDD:462301
kcnc1aXP_005168950.1 BTB_KCNC1_3 6..122 CDD:349721
Ion_trans 189..445 CDD:459842 17/55 (31%)
Blue background indicates that the domain is not in the aligned region.

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