DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcnk1b

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001277277.1 Gene:kcnk1b / 561206 ZFINID:ZDB-GENE-090312-78 Length:337 Species:Danio rerio


Alignment Length:309 Identity:82/309 - (26%)
Similarity:153/309 - (49%) Gaps:34/309 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIVCTFTYLLVGAAVFDALESETEKRRWEALQDAEDMIIRKYN-ISQEDFKVMETVVLKSESH-- 72
            |::....||:.||.||.::|...|....:.|::.:.:.::::. :|:|..:...:..|::.::  
Zfish    26 LVLGYVLYLIFGAVVFSSVELPYEDDLRQQLREIKRLFLQEHQCLSEERLERFLSKALEASNYGV 90

  Fly    73 ------KAGQQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGIPLGLVMFQSIGER 131
                  .|...|.||.:.::|:|||:|.||||:.|.:.|||.|.:.|:::|||..|:...::.:|
Zfish    91 SILNNASASWNWDFTSSLFFASTVLSTTGYGHTAPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQR 155

  Fly   132 VNRLSSY-VIKAVRSSLRCKRTVASEV--DLICVVTTLSSLTIAGGAAAFSKF-EGWSYFDSVYY 192
            :...|:: .|..|.:.....:.:.:.|  .|:.||.......|.  ||.||.. |.|::.:|.|:
Zfish   156 IMVYSTWRPIMYVHTRWGLSKPLVALVHATLLAVVAVSCFFLIP--AAIFSALEENWNFLESFYF 218

  Fly   193 CFITLTTIGFGDMVALQRDNALNRKPEYVMFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRD 257
            |||:|:|||.||.|..:..|...|: .|.:...:::|.||..:     |:||         |...
Zfish   219 CFISLSTIGLGDYVPGEAFNQRFRE-LYKLGITVYLLLGLIAM-----LVVL---------ETFC 268

  Fly   258 EAQAMQALQVAVKLEGDVITSNGSILSGYEGHDGQSLNGSNTSSMCSCH 306
            |.|.::.|:....|:.:......:|:.    ||..:.:....:::.|.|
Zfish   269 ELQQLKQLRKMFYLKKEKPQDRLAIME----HDHLAFSSMPDATIHSPH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 22/53 (42%)
Ion_trans_2 165..243 CDD:462301 26/78 (33%)
kcnk1bNP_001277277.1 Ion_trans_2 <100..157 CDD:462301 23/56 (41%)
Ion_trans_2 192..267 CDD:462301 29/91 (32%)

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