DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcng4a

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001103499.1 Gene:kcng4a / 561003 ZFINID:ZDB-GENE-050419-11 Length:538 Species:Danio rerio


Alignment Length:237 Identity:56/237 - (23%)
Similarity:90/237 - (37%) Gaps:75/237 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LGLVMFQSIGERVNRLSS--YVIKAVRSSL----------RCKRTVASEVDLICVVTTLSSLTIA 172
            ||||:      |:.|...  ||::..|.||          |..|.....:..:||..||.|..: 
Zfish   331 LGLVL------RILRALRILYVMRLARHSLGLQTLGLTVRRSTREFGLLLLFLCVAVTLFSPLV- 388

  Fly   173 GGAAAFSKFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPEYV---MFALIFILF 230
              ..|.|:..|...|.|:    ::..|::||:|:||||           |..:   :.||..||.
Zfish   389 --HLAESELTGVQDFSSIPASYWWAIISMTTVGYGDMV-----------PRSIPGQVVALSSILS 440

  Fly   231 GLAIVA----ASLNLLVLRFVTMNTEDER--RDEAQAMQALQVAVKLEGD-----------VITS 278
            |:.|:|    :..::....:..:..|.:|  ::|..|..|....::.|.|           |:| 
Zfish   441 GILIMAFPATSIFHMFSRSYQELKQEHDRLFKEECAAAAAATTGLEEEQDGGWVAFPPPRLVLT- 504

  Fly   279 NGSILSGYEGHDGQSLNGSNTSSMCSCHCICLNGNRHKKSSN 320
                              .:|.:..||..:.|.||..:.|.|
Zfish   505 ------------------PDTETAGSCEDLSLLGNGGETSGN 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 4/11 (36%)
Ion_trans_2 165..243 CDD:462301 24/88 (27%)
kcng4aNP_001103499.1 BTB_POZ_Kv6_KCNG 61..169 CDD:349691
Ion_trans 219..464 CDD:459842 39/152 (26%)
Blue background indicates that the domain is not in the aligned region.

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