DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and Kcnb1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_037318.2 Gene:Kcnb1 / 25736 RGDID:2954 Length:857 Species:Rattus norvegicus


Alignment Length:368 Identity:69/368 - (18%)
Similarity:135/368 - (36%) Gaps:113/368 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SETEKRRWEALQDAEDMIIRK-YNISQEDFKVMETVVLKSES-------HKAGQ----------- 76
            :|..|:.|:.|:.....:..| ..|....|.|:.|:.|...:       .:.||           
  Rat   169 AEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQSLDEFGQSTDNPQLAHVE 233

  Fly    77 --------------------QWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGIPLG 121
                                :|||......|..:|..:.|..:...|...|             .
  Rat   234 AVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNK-------------S 285

  Fly   122 LVMFQSIGE-----RVNRLSSYVIKAVRSSLRCK------RTVASEVDLICVVTTLSSLTIAGGA 175
            ::.||::..     |:.|:.. ::|..|.|...:      |...:|:.|:.       |.:|.|.
  Rat   286 VLQFQNVRRVVQIFRIMRILR-ILKLARHSTGLQSLGFTLRRSYNELGLLI-------LFLAMGI 342

  Fly   176 AAFS-------KFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPEYVMFALI--- 226
            ..||       |.|..:.|.|:    ::..||:||:|:||:.           |:.::..::   
  Rat   343 MIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDIY-----------PKTLLGKIVGGL 396

  Fly   227 FILFGLAIVAASLNLLVLRFVTMNTEDERRDEA-QAMQALQVAVKLEGDVITSNGSILSGYEGHD 290
            ..:.|:.::|..:.::|..|.....|.:|:::| :..:||:.|.:        ||||:|      
  Rat   397 CCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKR--------NGSIVS------ 447

  Fly   291 GQSLNGSNTSSMCSCHCIC-LNGNRHKKSSNLEKNNDAENQYK 332
             .::..:...|:.....:. .||....|...::.|:.:.|::|
  Rat   448 -MNMKDAFARSIEMMDIVVEKNGESIAKKDKVQDNHLSPNKWK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 10/58 (17%)
Ion_trans_2 165..243 CDD:462301 19/91 (21%)
Kcnb1NP_037318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
BTB_POZ_KCNB2 15..141 CDD:349719
Self-association. /evidence=ECO:0000269|PubMed:18463252, ECO:0000269|PubMed:19690160 59..75
Ion_trans 188..424 CDD:459842 48/267 (18%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 377..382 2/4 (50%)
Self-association. /evidence=ECO:0000269|PubMed:18463252, ECO:0000269|PubMed:19690160 448..481 4/32 (13%)
Kv2channel 467..678 CDD:397541 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..524 3/14 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 540..569
FFAT. /evidence=ECO:0000250|UniProtKB:Q14721 590..596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..802
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..857
Blue background indicates that the domain is not in the aligned region.

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