DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kvs-4

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001367099.1 Gene:kvs-4 / 190011 WormBaseID:WBGene00012967 Length:539 Species:Caenorhabditis elegans


Alignment Length:281 Identity:56/281 - (19%)
Similarity:105/281 - (37%) Gaps:75/281 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VCTFTYLLVGAA-----VFDALESETEKRRWEALQDAEDMIIRKYNISQEDFKVMETVVLKSESH 72
            ||:..::|:..:     ....|:..|::|.               |::.|:|..||.:.:     
 Worm   270 VCSVVFVLISISGLVLGSLPELQVATKQRN---------------NLTGEEFTEMEPMPI----- 314

  Fly    73 KAGQQWKFTGAFYYATTVLTTIGYG-HSTPSTVGGKLFTMCYAIVG--------IPLGLVMFQSI 128
                    .|...|...|..|:.|| ....|....|.|.....|:.        |.:.|::|...
 Worm   315 --------LGYIEYVCIVWFTMEYGLKMLVSAERSKTFRQLLNIIDLLAILPFIIEMLLLIFGIS 371

  Fly   129 GERVNRL-SSYVIKAVRSSLRCKRTV-----ASEVDLICVVTTLS-------SLTIAGGAAAFS- 179
            .|::..| .::::..:...||..|.:     :|.:.:.......|       ::.:..|...|| 
 Worm   372 TEQLRDLKGAFLVIRILRVLRVIRVLKLGRYSSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFST 436

  Fly   180 ------KFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPEYVMFALIFILFGLAI 234
                  |.|..|.|.|:    ::|.:|:||:|:||:..:.....|        .|...|..|:.:
 Worm   437 LVYFLEKDEPASKFHSIPAACWWCIVTMTTVGYGDLTPVTVPGKL--------VATGAIACGVLV 493

  Fly   235 VAASLNLLVLRFVTMNTEDER 255
            :|..:.::|..|:.: .|.||
 Worm   494 LALPITIIVDNFMKV-AETER 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 14/62 (23%)
Ion_trans_2 165..243 CDD:462301 21/95 (22%)
kvs-4NP_001367099.1 BTB_POZ_Kv 121..208 CDD:349626
Ion_trans 265..513 CDD:459842 54/279 (19%)
Blue background indicates that the domain is not in the aligned region.

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