DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kvs-5

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001294321.1 Gene:kvs-5 / 176899 WormBaseID:WBGene00021948 Length:600 Species:Caenorhabditis elegans


Alignment Length:154 Identity:33/154 - (21%)
Similarity:68/154 - (44%) Gaps:29/154 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LGLVMFQSIGERVNRLSSYVIKAVRSSLRCKRTVASEVDLICVVTTLSSLTIAGGAAAFSKFEGW 184
            |.::....:|.....|:::.: .:|.|.:..:.|.  |.::.|:...|:|..     ...:.|..
 Worm   465 LRVIRIAKLGRFSPGLANFAL-TIRKSKKQMQMVG--VVMMTVIIFFSTLIY-----FLERDEPG 521

  Fly   185 SYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPEYVMFALI---FILFGLAIVAASLNLL 242
            :.|.|:    ::|.:|:.|:|:||:|           |..|...|:   .|:.|:.::|..:.::
 Worm   522 TKFTSIPATFWWCVVTMATVGYGDLV-----------PVTVAGKLVGSGAIVCGVMVLALPITIM 575

  Fly   243 VLRF---VTMNTEDERRDEAQAMQ 263
            |..|   |.:..|:..:..||..|
 Worm   576 VNNFMQVVKLREEEIVKKYAQGDQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 2/11 (18%)
Ion_trans_2 165..243 CDD:462301 18/84 (21%)
kvs-5NP_001294321.1 BTB_POZ_Kv 139..228 CDD:349626
Ion_trans 388..587 CDD:459842 29/140 (21%)
Blue background indicates that the domain is not in the aligned region.

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