DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and shk-1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_871935.1 Gene:shk-1 / 174536 WormBaseID:WBGene00014261 Length:536 Species:Caenorhabditis elegans


Alignment Length:209 Identity:47/209 - (22%)
Similarity:87/209 - (41%) Gaps:53/209 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 YATTVLTTIGYGHSTPSTVGGKLF---------TMCYAIVGIPLGLV-MFQSIGERVNRLSSYVI 140
            :||:||..|.:....|..|  ..|         :|.:|::.: |.|| :|     ||.:||.:.:
 Worm   354 FATSVLNIIDFVAIAPFFV--NFFFADTSKSNSSMSFAVLRV-LRLVRVF-----RVFKLSRHSV 410

  Fly   141 ------KAVRSSLRCKRTVASEVDLICVVTTLSSLTIAGGAAAFSKFEGWSYFDSV----YYCFI 195
                  |..|||::       |..|:.....::.:..|.|.....:.|..|.|.|:    ::..:
 Worm   411 GLQILGKTFRSSVQ-------EFCLLIFFMAIALVLFASGMYFAEQGEPNSKFTSIPASFWFVLV 468

  Fly   196 TLTTIGFGDMVALQRDNALNRKPEYVMFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRDEAQ 260
            |:||:|:||:|.|        .|...:...:..:.|:..:|..:.::|..|.....::.|     
 Worm   469 TMTTVGYGDLVPL--------SPFGKVVGGMCAMIGVLTLALPVPIIVANFKHFYRQENR----- 520

  Fly   261 AMQALQVAVKLEGD 274
                 ..::|.:||
 Worm   521 -----LASMKSKGD 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 14/55 (25%)
Ion_trans_2 165..243 CDD:462301 17/81 (21%)
shk-1NP_871935.1 BTB_POZ 133..229 CDD:453885
Ion_trans 274..519 CDD:459842 43/187 (23%)
Blue background indicates that the domain is not in the aligned region.

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