DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and Kcnb2

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_446452.2 Gene:Kcnb2 / 117105 RGDID:621349 Length:907 Species:Rattus norvegicus


Alignment Length:426 Identity:85/426 - (19%)
Similarity:150/426 - (35%) Gaps:149/426 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETEKRRWEALQDAEDMIIRK-YNISQEDFKVMETVVLK-------SESHKAGQ------------ 76
            |..|:.|:.|:.....:..| ..|....|.|:.|:.|.       .|:.:.||            
  Rat   174 EKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLNTLPELQENDEFGQPSDNRKLAHVEA 238

  Fly    77 -------------------QWK-FTGAF----------YYATTVLTTIGYGHSTPSTVGGKLFTM 111
                               :|| |.|..          ||.|..||     .|..|         
  Rat   239 VCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLT-----ESNKS--------- 289

  Fly   112 CYAIVGIPLGLVMFQSIGE-----RVNRLSSYVIKAVRSSLRCK------RTVASEVDLICVVTT 165
                      ::.||::..     |:.|:.. ::|..|.|...:      |...:|:.|:.    
  Rat   290 ----------VLQFQNVRRVVQIFRIMRILR-ILKLARHSTGLQSLGFTLRRSYNELGLLI---- 339

  Fly   166 LSSLTIAGGAAAFS-------KFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPE 219
               |.:|.|...||       |.|..:.|.|:    ::..||:||:|:||:.           |:
  Rat   340 ---LFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIY-----------PK 390

  Fly   220 YVMFALI---FILFGLAIVAASLNLLVLRFVTMNTEDERRDEA-QAMQALQVAVKLEGDVITSN- 279
            .::..::   ..:.|:.::|..:.::|..|.....|.:|:::| :..:||:.| |..|.:::.| 
  Rat   391 TLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERA-KRNGSIVSMNL 454

  Fly   280 -GSILSGYEGHD------GQSLNGSNTSSMCSCHCICLNGNR----HKKSSNLEKNNDAENQY-K 332
             .:.....|..|      |:|.|..:  |:...|   |:.:|    .|..|....|...||:| :
  Rat   455 KDAFARSMELIDVAVEKAGESANIKD--SVDDNH---LSPSRWKWARKALSETSSNKSYENKYQE 514

  Fly   333 LRQSPTHIRHLLPEVVPMQDLNYDYDTQSLHTLADR 368
            :.|..:|           :.||....:...|..|.:
  Rat   515 VSQKDSH-----------EQLNNTSSSSPQHLSAQK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 13/69 (19%)
Ion_trans_2 165..243 CDD:462301 19/91 (21%)
Kcnb2NP_446452.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 52/278 (19%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386 2/4 (50%)
Kv2channel 471..755 CDD:397541 19/85 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 550..570
FFAT. /evidence=ECO:0000250|UniProtKB:Q92953 605..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..860
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 884..907
Blue background indicates that the domain is not in the aligned region.

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