DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Task6 and kcnk4a

DIOPT Version :9

Sequence 1:NP_001262541.1 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_021336981.1 Gene:kcnk4a / 101885817 ZFINID:ZDB-GENE-141211-80 Length:485 Species:Danio rerio


Alignment Length:442 Identity:98/442 - (22%)
Similarity:166/442 - (37%) Gaps:139/442 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KVMETVVLKSESHKAG----------QQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYA 114
            ||::.||   ::.:||          .:|..:.||::..|::||||:|:.:|.|.||:||.:.||
Zfish     3 KVLQKVV---DAIEAGVDARSTSNYTSRWDPSNAFFFCGTIITTIGFGNISPKTKGGQLFCIFYA 64

  Fly   115 IVGIPLGLVMFQSIGERVNRLSSYVIKAVRSSLRCKRTVASEVDLICVVTTL---SSLTIAGGAA 176
            :||||:..::...:|:.:..|....:..|.:....|....:.|.:|..|.::   ..:.||....
Zfish    65 LVGIPMFGILLAGVGDHLGTLLRRAVAKVETLFLRKGVKPTSVRIISAVFSILIGCLVFIAVPTM 129

  Fly   177 AFSKFEGWSYFDSVYYCFITLTTIGFGDMVALQRDNALNRKPEYVMFALIFILFGLAIVAASLNL 241
            .|.:.|.||..::||:..|||||:||||.||   :|..:..|.|.....::|:||||..|:.|.:
Zfish   130 VFQEVESWSLLEAVYFVVITLTTVGFGDYVA---ENRRDGTPLYKPLVWLWIVFGLAYFASILTM 191

  Fly   242 L--VLRFVTMNTEDERR-------DEAQAMQALQV------------------------------ 267
            :  .||.::..|..|..       |..|.:|.:.:                              
Zfish   192 IGNWLRVLSKKTRAEMEELRAHATDWTQNIQNMSMDFRIPVPLDLNDPFQLQRRRRRKRHHHHHH 256

  Fly   268 --------------AVKLEGDVITSNGSILSG--------------------------YEGHDGQ 292
                          .:.|:.|:|..||.::.|                          ||...|.
Zfish   257 HHRHPRPNTTGLTHGISLDADIIRENGHLILGWPTCRYKPASEVLSQSRSMSRIDGAHYEMRPGS 321

  Fly   293 SL-----------------------------NGSNTSSMCSCHCICLNGNRHKKSSNLEKNNDAE 328
            .|                             :.|.:.|..:......:.:.::..||...:.|.|
Zfish   322 RLTVGPTSRSISRLELKPASRAGSRAISRSPSQSESGSFSASETPSESWSEYEYESNSCNSEDVE 386

  Fly   329 NQYKLRQSPTHIRHLLPEVV------PMQDL------NYDYDTQSLHTLADR 368
            :..|..:.....::.:|.||      |...|      |..|..:|...|:||
Zfish   387 SGAKASRRSLESQNDVPIVVVASCSPPRPSLLDFFGENLAYIDESSDALSDR 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_001262541.1 Ion_trans_2 <77..132 CDD:285168 22/54 (41%)
Ion_trans_2 169..247 CDD:285168 31/79 (39%)
kcnk4aXP_021336981.1 Ion_trans_2 24..80 CDD:311712 21/55 (38%)
Ion_trans_2 116..197 CDD:311712 29/83 (35%)
THRAP3_BCLAF1 329..>419 CDD:317794 12/89 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590225
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.