DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcns2

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_004915190.2 Gene:kcns2 / 101732753 XenbaseID:XB-GENE-29077351 Length:477 Species:Xenopus tropicalis


Alignment Length:186 Identity:41/186 - (22%)
Similarity:69/186 - (37%) Gaps:66/186 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQNVRTISLIVCTFTYLLVGAAVFDALESETEKRRWEALQDAEDMIIRKYNISQEDFKVMETVVL 67
            |.:.|.:.|::   .||.||.::|..:                     .|.|.:|:...:.|:  
 Frog   323 KYSYREVGLLL---LYLSVGISIFSVV---------------------AYTIEKEENDGLATI-- 361

  Fly    68 KSESHKAGQQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGI-----PLGLVM--F 125
                         ...:::||..:||:|||...|.|:.|||......:.||     |:.|:.  |
 Frog   362 -------------PACWWWATVSMTTVGYGDVVPGTIAGKLTASACILAGILVVVLPITLIFNKF 413

  Fly   126 QSIGERVNRLSSYVIKAVRS-----------SLRCKRTVASEVDLICVVTTLSSLT 170
            .....|..:|.:    |:||           |:..:...|.:|.     |.::|||
 Frog   414 SHFYRRQKQLEN----AMRSCDFGDGVKDVPSVNLRDYYAHKVK-----TLMASLT 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 17/60 (28%)
Ion_trans_2 165..243 CDD:462301 3/6 (50%)
kcns2XP_004915190.2 BTB_POZ_KCNS2 18..124 CDD:349734
Ion_trans 186..421 CDD:459842 30/136 (22%)
Blue background indicates that the domain is not in the aligned region.

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