DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcna4

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_004913509.1 Gene:kcna4 / 100495646 XenbaseID:XB-GENE-492827 Length:688 Species:Xenopus tropicalis


Alignment Length:71 Identity:17/71 - (23%)
Similarity:24/71 - (33%) Gaps:19/71 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 KLSFPVTGSTTPEATIQQFQTALQLASSNSNSKSQITESIG---CSYAQCQSRLDILCLFS---H 150
            |..||:....|.....:|.:            :.|:|...|   .:|.....| ..||..|   |
 Frog   128 KSDFPLLAPPTNYGLYEQLK------------QRQLTPKAGLKQSTYTSSYPR-PPLCAMSWREH 179

  Fly   151 SSTVPP 156
            :..|||
 Frog   180 AVPVPP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 7/39 (18%)
Ion_trans_2 165..243 CDD:462301
kcna4XP_004913509.1 K_channel_TID 1..83 CDD:429748
BTB_POZ 193..319 CDD:453885
Ion_trans 322..605 CDD:459842
Blue background indicates that the domain is not in the aligned region.

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