DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcna1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_004912857.1 Gene:kcna1 / 100492822 XenbaseID:XB-GENE-991584 Length:489 Species:Xenopus tropicalis


Alignment Length:116 Identity:31/116 - (26%)
Similarity:50/116 - (43%) Gaps:38/116 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQNVRTISLIVCTFTYLLVGAAVFDALESETEKRRWEALQDAEDMIIRKYNISQEDFKVMETVVL 67
            |.::|.:.|::   .:|.:|..:|.:           |:..||         ::||         
 Frog   314 KASMRELGLLI---FFLFIGVILFSS-----------AVYFAE---------AEED--------- 346

  Fly    68 KSESHKAGQQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGI 118
              |||.|    ....||::|...:||:|||...|.|:|||:.....||.|:
 Frog   347 --ESHFA----SIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGV 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 16/41 (39%)
Ion_trans_2 165..243 CDD:462301
kcna1XP_004912857.1 BTB_POZ 34..160 CDD:453885
Ion_trans 163..412 CDD:459842 31/116 (27%)
Blue background indicates that the domain is not in the aligned region.

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