DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcnb2

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_002937117.3 Gene:kcnb2 / 100489419 XenbaseID:XB-GENE-989392 Length:901 Species:Xenopus tropicalis


Alignment Length:427 Identity:81/427 - (18%)
Similarity:148/427 - (34%) Gaps:157/427 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETEKRRWEALQDAEDMIIRK-YNISQEDFKVMETVVLK-------SESHKAGQ------------ 76
            |..|:.|:.|:.....:..| ..|....|.|:.|:.|.       .|:.:.||            
 Frog   174 EKRKKLWDLLEKPNSSVAAKILAIISILFIVLSTIALSLNTLPDLQETDEFGQPNDNPQLAHVEA 238

  Fly    77 -------------------QWK-FTGAF----------YYATTVLTTIGYGHSTPSTVGGKLFTM 111
                               :|| |.|..          ||.|..||     .|..|         
 Frog   239 VCIAWFTMEYLLRFLSSPNKWKFFKGPLNIIDLLAILPYYVTIFLT-----ESNKS--------- 289

  Fly   112 CYAIVGIPLGLVMFQSIGE-----RVNRLSSYVIKAVRSSLRCK------RTVASEVDLICVVTT 165
                      ::.||::..     |:.|:.. ::|..|.|...:      |...:|:.|:.    
 Frog   290 ----------VLQFQNVRRVVQIFRIMRILR-ILKLARHSTGLQSLGFTLRRSYNELGLLI---- 339

  Fly   166 LSSLTIAGGAAAFS-------KFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALNRKPE 219
               |.:|.|...||       |.|..:.|.|:    ::..||:||:|:||:.           |:
 Frog   340 ---LFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIY-----------PK 390

  Fly   220 YVMFALI---FILFGLAIVAASLNLLVLRFVTMNTEDERRDEA-QAMQALQVAVKLEGDVITSNG 280
            .::..::   ..:.|:.::|..:.::|..|.....|.:|:::| :..:||:.|.:        ||
 Frog   391 TLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKR--------NG 447

  Fly   281 SILSGYEGHDGQSLNGSNTSSMCSCHCICLNGNRHKKSSNLEKNNDAENQYKLRQSPTHIRHLLP 345
            ||:|       .:|..:...||.....:            ::|:.|..|:   .:.|:. .||.|
 Frog   448 SIVS-------MNLKDAFARSMELIDVV------------VDKSADGSNK---MEKPSD-NHLSP 489

  Fly   346 EVVPMQDLNYDYDTQSLHTLADRGTMDSSYMGVDMAD 382
            .       .:.:..::|...:...:.|:.|..|...|
 Frog   490 S-------RWKWSRRTLSETSSNKSFDNKYQEVSQHD 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 13/69 (19%)
Ion_trans_2 165..243 CDD:462301 19/91 (21%)
kcnb2XP_002937117.3 BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 52/278 (19%)
Kv2channel 471..755 CDD:397541 12/60 (20%)
Blue background indicates that the domain is not in the aligned region.

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