DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcnb1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_031750650.1 Gene:kcnb1 / 100489405 XenbaseID:XB-GENE-982937 Length:875 Species:Xenopus tropicalis


Alignment Length:159 Identity:35/159 - (22%)
Similarity:60/159 - (37%) Gaps:51/159 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQNVRTISLIVCTFTYLLVGAAVFDALESETEKRRWEALQDAEDMIIRKYNISQEDFKVMETVVL 67
            :::...:.|::   .:|.:|..:|.:|....||       |.||          ..||       
 Frog   325 RRSYNELGLLI---LFLAMGIMIFSSLVFFAEK-------DEED----------TKFK------- 362

  Fly    68 KSESHKAGQQWKFTGAFYYATTVLTTIGYGHSTPSTVGGKLF--TMCYA---IVGIPLGLVMFQS 127
                       ....:|::||..:||:|||...|.|:.||:.  ..|.|   ::.:|:.::    
 Frog   363 -----------SIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPII---- 412

  Fly   128 IGERVNRLSSYVIKAVRSSLRCKRTVASE 156
                ||..|.:..:..|.....||..|.|
 Frog   413 ----VNNFSEFYKEQKRQEKAIKRREALE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 15/58 (26%)
Ion_trans_2 165..243 CDD:462301
kcnb1XP_031750650.1 BTB_POZ_KCNB2 15..141 CDD:349719
Ion_trans 188..424 CDD:459842 30/144 (21%)
Kv2channel 467..720 CDD:397541
Blue background indicates that the domain is not in the aligned region.

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