DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Task6 and kcnd1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_031747765.1 Gene:kcnd1 / 100488387 XenbaseID:XB-GENE-6047565 Length:631 Species:Xenopus tropicalis


Alignment Length:306 Identity:62/306 - (20%)
Similarity:115/306 - (37%) Gaps:97/306 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 AIVGIPLGLVMFQSIGERVN------------------------RLSSYVIKAVRSSLRCKRTVA 154
            ||:...:||||.::  |.|:                        |:..|.:|:      |    |
 Frog   269 AIMPFYIGLVMPEN--ENVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKS------C----A 321

  Fly   155 SEVDLICVVTTLSSLTIAGGAAAFSKFEGWSYFDSV----YYCFITLTTIGFGDMVALQRDNALN 215
            ||:..:....|::.:..|.......|....:.|.|:    :|..:|:||:|:||||         
 Frog   322 SELGFLLFSLTMAIIIFATVMFYAEKGTSKTKFTSIPAAFWYTIVTMTTLGYGDMV--------- 377

  Fly   216 RKPEYV---MFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRDEAQAMQALQVA-VKLEGDVI 276
              |:.:   :|..|..|.|:.::|..:.::|..|..:..:::|.|:.:|.|.:::| ::|...  
 Frog   378 --PDTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQQKIRLARIRLAKS-- 438

  Fly   277 TSNGSILSGYEGHDGQSLNGSNTSSMCSCHCICLNGNRHKKSSNLEKNNDA-----ENQYKLRQS 336
            .:.|:.|                              |:|:|..||:..::     :|:......
 Frog   439 NTTGAFL------------------------------RYKESGGLEEGTESHALCVKNRSAFELQ 473

  Fly   337 PTHIRHLLP-----EVVPMQDLNYDYDTQSLHTLADRGTMDSSYMG 377
            ..|:.|.|.     |.......:....|:|:.....|.|..||..|
 Frog   474 HHHLLHCLEKTTCHEFTDQHTYSEALMTESIGYRTSRSTSVSSQQG 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 7/17 (41%)
Ion_trans_2 165..243 CDD:462301 20/84 (24%)
kcnd1XP_031747765.1 BTB_POZ_KCND1 6..143 CDD:349724
Ion_trans 184..415 CDD:459842 37/168 (22%)
DUF3399 466..542 CDD:463381 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.