DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcnf1b

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_005157014.1 Gene:kcnf1b / 100334378 ZFINID:ZDB-GENE-090312-39 Length:484 Species:Danio rerio


Alignment Length:358 Identity:68/358 - (18%)
Similarity:129/358 - (36%) Gaps:100/358 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIVCTFTYLLVGAAVF------DALESETEKRRWE--ALQDAEDMIIRKYNISQEDFKVMETVV- 66
            :.|.:|.::|:.:.|.      |....::|..|.|  :|...|...|..:.:        |.|: 
Zfish   182 IAVVSFLFILISSVVMCLGTLPDLQVEDSEGNRVEHPSLDAIETACIGWFTV--------EYVLR 238

  Fly    67 LKSESHKAGQQWKFTGAF-----------YYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGIPL 120
            |.|..:|.    :|..:|           :|...|||.:|       |...:|..:..|:..:  
Zfish   239 LASSPNKL----RFALSFMNMIDFLAVLPFYVVLVLTCLG-------TAMMELVNVQQAVQAL-- 290

  Fly   121 GLVMFQSIGERVNRLSSYVIKAVRSS-------LRCKRTVASEVDLICVVTTLSSLTIAGGAAAF 178
                      |:.|::. :.|..|.|       ...||:. .|:.|:.:...:.....:......
Zfish   291 ----------RIMRIAR-IFKLARHSSGLQTLTYALKRSF-KELGLLLMYMGVGIFVFSALGYTM 343

  Fly   179 SKFEGWSYFDSV----YYCFITLTTIGFGDM---VALQRDNALNRKPEYVMFALIFILFGLAIVA 236
            .:....:.|.|:    ::..||:||:|:||:   ..|.|.|           |.|..|.|:..:|
Zfish   344 EQSHPETLFRSIPQSFWWAIITMTTVGYGDIYPKTTLGRCN-----------AAISFLCGVIAIA 397

  Fly   237 ASLNLLVLRFV-------TMNTEDERRDEAQAMQALQVAVKLEGDVITSNGSILSGYEGHD--GQ 292
            ..::.::..||       .:.|..:...|...::||::.|:             |.....|  |:
Zfish   398 LPIHPIINNFVIYYNKQKVLETAAKHELELMELRALELTVR-------------SASRRSDAPGR 449

  Fly   293 SLNGSNTSSMCSCHCICLNGNRHKKSSNLEKNN 325
            :..|:..:|........|:|....:...|:|.:
Zfish   450 AWEGAMRASRSDTFIPLLSGAHRTEREPLKKKS 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 10/64 (16%)
Ion_trans_2 165..243 CDD:462301 17/84 (20%)
kcnf1bXP_005157014.1 BTB_POZ_Kv5_KCNF1 22..136 CDD:349690
Ion_trans 179..415 CDD:459842 54/276 (20%)
Blue background indicates that the domain is not in the aligned region.

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