DRSC/TRiP Functional Genomics Resources

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Protein Alignment Task6 and kcng1

DIOPT Version :10

Sequence 1:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001096675.1 Gene:kcng1 / 100125206 XenbaseID:XB-GENE-1011042 Length:508 Species:Xenopus tropicalis


Alignment Length:231 Identity:55/231 - (23%)
Similarity:89/231 - (38%) Gaps:49/231 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YYATTVLTTIGYGHSTPSTVGGKLFTMCYAIVGIPLGLVMFQSIGERVNRLSSYVIKAVRSSL-- 147
            ||.|.|:.....|...|.:....|..     ||:.|.::       |..|: .||::..|.||  
 Frog   306 YYITLVVDNTSDGQKKPGSGNSYLDK-----VGLVLRIL-------RALRI-LYVMRLARHSLGL 357

  Fly   148 --------RCKRTVASEVDLICVVTTLSS--LTIAGGAAAFSKFEGWSYFDSVYYCF----ITLT 198
                    ||.|.....:..:||...|.:  |.:.....|.|:     .|.|:..|:    ||:|
 Frog   358 QTLGLTARRCTREFGLLLLFLCVAIALFAPLLYLIENEMADSQ-----EFTSIPACYWWAVITMT 417

  Fly   199 TIGFGDMVALQRDNALNRKPEYV---MFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRDEAQ 260
            |:|:||||           |..:   :.||..||.|:.::|..:..:...|.....|.::..|..
 Frog   418 TVGYGDMV-----------PRSIPGQVVALSSILSGILLMAFPVTSIFHTFSRSYIELKQEQERL 471

  Fly   261 AMQALQVAVKLEGDVIT-SNGSILSGYEGHDGQSLN 295
            ..:..|:.:|.:..:.: |.||.:.......|...|
 Frog   472 MCRKAQLLMKTKSQMSSISQGSDMLSESASSGAKAN 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 10/46 (22%)
Ion_trans_2 165..243 CDD:462301 23/86 (27%)
kcng1NP_001096675.1 BTB_POZ_KCNG1_2 59..172 CDD:349728
Ion_trans 221..461 CDD:459842 46/183 (25%)
Blue background indicates that the domain is not in the aligned region.

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