Protein Alignment B52 and SNP1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_012203.1
• Gene: SNP1 / 854749
• SGDID: S000001323
• Length: 300
• Species: Saccharomyces cerevisiae
• Alignment Length: 131
• Identity: 33/131 - (25%)
• Similarity: 56/131 - (42%)
• Gaps: 23/131 - (17%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYEL---NG 59
            :::|.|||.:.|.:|:::|..:|....|.|        ..||.|:.|:|...:..|..|:   .|
Yeast   109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRG 173

  Fly    60 KELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGG---------GRYNEKNKNSRSSSRYGPP 115
            .::.....:|:..||......:.|   |.||..||.|         ||:...:.::.:...|.|.
Yeast   174 IQIKDRICIVDIERGRTVKYFKPR---RLGGGLGGRGYSNRDSRLPGRFASASTSNPAERNYAPR 235

  Fly   116 L 116
            |
Yeast   236 L 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	19/78 (24%)
		RRM2_SRSF4_like	120..191	CDD:410012
SNP1	NP_012203.1	U1snRNP70_N	6..97	CDD:432406
		RRM_SNP1_like	89..201	CDD:410194	23/94 (24%)