Protein Alignment B52 and RIE1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_011766.3
• Gene: RIE1 / 853165
• SGDID: S000003482
• Length: 781
• Species: Saccharomyces cerevisiae
• Alignment Length: 197
• Identity: 43/197 - (21%)
• Similarity: 66/197 - (33%)
• Gaps: 75/197 - (38%)

  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILI------KN---------------------GYGF 41
            |.:||..:|....:.||..|:|.:|....:.:      ||                     ||||
Yeast   540 SNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGF 604

  Fly    42 VEFEDYRDADDAVYELNGKELLGERVV---VEPARGTARGSNRD------------------RYD 85
            |.||...||..|:...:|.::..::|:   ....||....|:.|                  .|.
Yeast   605 VSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSDDDDQSQTDNSSKFQNFQPHNDYH 669

  Fly    86 DRYGGRRGGGGGRYNEK--------NKNSRSSSR--YGPPLR---------TEYRLIVENLSSRV 131
            ..|       ..:||:|        |::.:..||  |..||:         ..|.||..| .:..
Yeast   670 KAY-------PTKYNKKFINALMTQNQSQQQVSRENYFIPLQYPNTNTKPVNSYNLISAN-QNNA 726

  Fly   132 SW 133
            :|
Yeast   727 NW 728

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	22/98 (22%)
		RRM2_SRSF4_like	120..191	CDD:410012	5/14 (36%)
RIE1	NP_011766.3	PABP-1234	195..757	CDD:130689	43/197 (22%)
		RRM3_CELF1-6	542..634	CDD:409797	22/91 (24%)