Protein Alignment B52 and NSR1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_011675.1
• Gene: NSR1 / 853064
• SGDID: S000003391
• Length: 414
• Species: Saccharomyces cerevisiae
• Alignment Length: 295
• Identity: 69/295 - (23%)
• Similarity: 114/295 - (38%)
• Gaps: 84/295 - (28%)

  Fly     6 VYVGGLPYGVRERDLERFF--------------KGYGRTRDILIKNGYGFVEFEDYRDADDAVYE 56
            ::||.|.:.:.:..|::.|              :|..|:|      |||:|:||:...|:.|:.|
Yeast   170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSR------GYGYVDFENKSYAEKAIQE 228

  Fly    57 LNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYG-PPLRTEY 120
            :.|||:.|..:..:.:.....|:|     ||                     :.::| .|.....
Yeast   229 MQGKEIDGRPINCDMSTSKPAGNN-----DR---------------------AKKFGDTPSEPSD 267

  Fly   121 RLIVENLSSRVSWQDLKDYMRQAGEV------TYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 179
            .|.:.|||.......:.:...:.|||      |:.:. :|.:..|.|:|:::.|.|.|::.|...
Yeast   268 TLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPET-EQPKGFGYVQFSNMEDAKKALDALQGE 331

  Fly   180 ELNGRRIHL-----VEDRRGGRSG----GGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKS 235
            .::.|.:.|     ..:..|||.|    ||.|.|||.:|....|..:|.
Yeast   332 YIDNRPVRLDFSSPRPNNDGGRGGSRGFGGRGGGRGGNRGFGGRGGARG---------------- 380

  Fly   236 RSRSKSRGGRSKSKSPVKSRSRSRSRSNKSRDVSK 270
                 .|||...|.|...:....|||:..|...||
Yeast   381 -----GRGGFRPSGSGANTAPLGRSRNTASFAGSK 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	21/81 (26%)
		RRM2_SRSF4_like	120..191	CDD:410012	18/81 (22%)
NSR1	NP_011675.1	RRM1_gar2	169..244	CDD:409881	21/79 (27%)
		RRM2_gar2	269..341	CDD:409882	17/72 (24%)