Protein Alignment B52 and GBP2

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_009916.1
• Gene: GBP2 / 850346
• SGDID: S000000517
• Length: 427
• Species: Saccharomyces cerevisiae
• Alignment Length: 269
• Identity: 55/269 - (20%)
• Similarity: 89/269 - (33%)
• Gaps: 98/269 - (36%)

  Fly     3 GSRVYVGGLPYG-------VRERDLERFFKGYGRT--RDILIKN--------------------- 37
            |||.:.||...|       :.||||||.|....|.  ..|.::|
Yeast    85 GSRSFRGGRGGGRGRTLGPIVERDLERQFDATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVV 149

  Fly    38 ------------GYGFVEFEDYRDADDAVYELNGKELLGERVVV-------EPARGTARGSNRDR 83
                        |.|.|||.......||:.:.:|...:..:::|       |.|:..::.:.|:.
Yeast   150 EADIITSKGHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMVRQDNPPPEAAKEFSKKATREE 214

  Fly    84 YDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTY 148
            .|:                                .:.:.:.||...::||.|||..::.|.|..
Yeast   215 IDN--------------------------------GFEVFIINLPYSMNWQSLKDMFKECGHVLR 247

  Fly   149 ADAHKQ----RRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGGRSGGGGGSGRGRSR 209
            ||....    .|..|.|.:.:..:|..||:..:..|:.||.:.:.|             ||...|
Yeast   248 ADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVRE-------------GRFNKR 299

  Fly   210 SSSSRSRSR 218
            .::.|...|
Yeast   300 KNNDRYNQR 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	25/117 (21%)
		RRM2_SRSF4_like	120..191	CDD:410012	20/74 (27%)
GBP2	NP_009916.1	RRM1_HRB1_GBP2	121..197	CDD:410184	11/75 (15%)
		RRM2_HRB1_GBP2	218..292	CDD:410185	20/73 (27%)
		RRM3_HRB1_GBP2	347..425	CDD:410186