Protein Alignment B52 and SR34

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_850933.1
• Gene: SR34 / 839262
• AraportID: AT1G02840
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 339
• Identity: 142/339 - (41%)
• Similarity: 190/339 - (56%)
• Gaps: 53/339 - (15%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGKELLGE 65
            ||||.||..:|||::|..|..||....|.:|     .||.||||:|.|||:||::..:|.:..|.
plant     9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGH 73

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130
            |:.||.|.|..|.|: |......||.||||.||       ....|| ||..|:|:|::|..|.|.
plant    74 RLRVELAHGGRRSSD-DTRGSFNGGGRGGGRGR-------GDGGSR-GPSRRSEFRVLVTGLPSS 129

  Fly   131 VSWQDLKDYMRQAGEVTYADAHKQRR-NEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRG 194
            .|||||||:||:.|:|.::..::..| ..|||::....|||.|::||||||.
plant   130 ASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF------------- 181

  Fly   195 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSR 259
             |:....|..|.|...|...|||.||.|      |:|:|:||||     |||.|:|  :||||||
plant   182 -RNAFSNGYVRVREYDSRKDSRSPSRGR------SYSKSRSRSR-----GRSVSRS--RSRSRSR 232

  Fly   260 SRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRS--KSIHRD-SRSRDRS 321
            |||.|    :||..:|.:::.||||    ..||:|||.|.|.|||||||  .|:.:: |:|..:.
plant   233 SRSPK----AKSSRRSPAKSTSRSP----GPRSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKP 289

  Fly   322 ASAENKSRSRSRSR 335
            :.|::...:||.||
plant   290 SPAKSPIHTRSPSR 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	33/72 (46%)
		RRM2_SRSF4_like	120..191	CDD:410012	29/71 (41%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:410011	31/69 (45%)
		RRM2_SF2_plant_like	119..194	CDD:410014	32/88 (36%)