Protein Alignment B52 and AT5G53680

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_200179.1
• Gene: AT5G53680 / 835449
• AraportID: AT5G53680
• Length: 169
• Species: Arabidopsis thaliana
• Alignment Length: 138
• Identity: 39/138 - (28%)
• Similarity: 57/138 - (41%)
• Gaps: 20/138 - (14%)

  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGR--------TRDILIKNGYGFVEFEDYRDADDAVYELN-- 58
            :::||||||:..|:..|..|||.:|.        .|:.....|||||.|:|...|..|..:.|
plant    13 TKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACKDPNPT 77

  Fly    59 --GK------ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNE--KNKNSRSSSRYG 113
              |:      ..:|.:|....::.:.......|||.:|..|......:.|.  .|.|:...|...
plant    78 IEGRITNCKLAFVGAKVKPNQSQPSNLPQLLPRYDPQYNPRYDPMSYQQNRMANNTNNGIGSIQL 142

  Fly   114 PPLRTEYR 121
            ..|.||.|
plant   143 QTLLTENR 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	26/86 (30%)
		RRM2_SRSF4_like	120..191	CDD:410012	1/2 (50%)
AT5G53680	NP_200179.1	RRM_SF	13..88	CDD:473069	24/74 (32%)