Protein Alignment B52 and Cstf2t

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_112539.2
• Gene: Cstf2t / 83410
• MGIID: 1932622
• Length: 632
• Species: Mus musculus
• Alignment Length: 249
• Identity: 59/249 - (23%)
• Similarity: 86/249 - (34%)
• Gaps: 92/249 - (36%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRT--------RDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
            |:||.:||...|..|:..|...|..        |:.....||||.|::|...|..|:..|||:|.
Mouse    18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 82

  Fly    63 LGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSS---------SRYGPP--- 115
            .|..:.|:.|.                          :||||....|         |.||.|
Mouse    83 SGRALRVDNAA--------------------------SEKNKEELKSLGPAAPIIDSPYGDPIDP 121

  Fly   116 ---------------------LRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEG 159
                                 |..:.:|.|:|     |.|:.::.:.|..::.||....|
Mouse   122 EDAPESITRAVASLPPEQMFELMKQMKLCVQN-----SHQEARNMLLQNPQLAYALLQAQ----- 176

  Fly   160 VVEFASLSDMKTAIEKLDDTELNGRRIHLV-------EDRRGGRSGGGGGSGRG 206
            ||  ..:.|.:.|::.|.      |:||:.       :...|...||.|.||.|
Mouse   177 VV--MRIMDPEIALKILH------RKIHVTPLIPGKSQPVSGPGPGGPGPSGPG 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	25/75 (33%)
		RRM2_SRSF4_like	120..191	CDD:410012	17/77 (22%)
Cstf2t	NP_112539.2	RRM_CSTF2_CSTF2T	10..94	CDD:410072	25/101 (25%)
		CSTF2_hinge	112..191	CDD:433869	18/90 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	201..296		7/22 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	365..433
		8 X 5 AA tandem repeats of M-E-T-R-[AG]	428..466
		12 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q	508..565
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	519..590
		CSTF_C	588..628	CDD:464130