Protein Alignment B52 and AT4G36960

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_568011.1
• Gene: AT4G36960 / 829850
• AraportID: AT4G36960
• Length: 379
• Species: Arabidopsis thaliana
• Alignment Length: 197
• Identity: 42/197 - (21%)
• Similarity: 74/197 - (37%)
• Gaps: 55/197 - (27%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKE 61
            ::.|.|:|:.:....|:.:...:|...|.::        ..|:|:|.|....||.:|   |.|:.
plant     4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA---LKGEH 65

  Fly    62 LLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVEN 126
            .||.| ::|....|.:...|.                                |.:...|:.|..
plant    66 FLGNR-ILEVKVATPKEEMRQ--------------------------------PAKKVTRIFVAR 97

  Fly   127 LSSRVSWQDLKDYMRQAGEVTYADAH-------KQRRNEGVVEFASLSDMKTAIEKLDDTELNGR 184
            :.|.||..|.:.:..:.||:|  |.:       ||.|..|.:.|:|...::..:|  |..:|.|.
plant    98 IPSSVSESDFRSHFERYGEIT--DLYMPKDYNSKQHRGIGFITFSSADSVEDLME--DTHDLGGT 158

  Fly   185 RI 186
            .:
plant   159 TV 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	19/76 (25%)
		RRM2_SRSF4_like	120..191	CDD:410012	20/74 (27%)
AT4G36960	NP_568011.1	RRM_SF	4..77	CDD:473069	19/76 (25%)
		PABP-1234	5..>378	CDD:130689	42/196 (21%)
		RRM_SF	91..166	CDD:473069	20/74 (27%)