Protein Alignment B52 and RSZ22

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_194886.1
• Gene: RSZ22 / 829285
• AraportID: AT4G31580
• Length: 200
• Species: Arabidopsis thaliana
• Alignment Length: 286
• Identity: 92/286 - (32%)
• Similarity: 111/286 - (38%)
• Gaps: 116/286 - (40%)

  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGE 65
            ||||||.|...|.||:||..|:.:|..|.:.:..   ||.|::|||.|||.||:..|:||.  |.
plant     2 SRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDGKN--GW 64

  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130
            ||.....||...|..|       ||.||||||     .:..|..|
plant    65 RVEQSHNRGERGGGGR-------GGDRGGGGG-----GRGGRGGS-------------------- 97

  Fly   131 VSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGG 195
                |||.|  :.||..:              ||              .|...|
plant    98 ----DLKCY--ECGETGH--------------FA--------------RECRNR----------- 117

  Fly   196 RSGGGGGSGRGRSRSSSSRSRSRSR-RRSRS--RRSSHSRSKS----RSRSKS---RGGRSKSKS 250
                 ||:||.||:   ||||:..| |||.|  |||...|::|    |.||.|   ..|||.|:|
plant   118 -----GGTGRRRSK---SRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRS 174

  Fly   251 P----------------VKSRSRSRS 260
            |                :|.|.||||
plant   175 PPPYRAREEVPYANGNGLKERRRSRS 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	31/71 (44%)
		RRM2_SRSF4_like	120..191	CDD:410012	10/70 (14%)
RSZ22	NP_194886.1	RRM_SRSF3_like	3..71	CDD:409808	31/69 (45%)
		zf-CCHC	100..114	CDD:395050	6/43 (14%)