Protein Alignment B52 and AT3G47120

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_190296.1
• Gene: AT3G47120 / 823865
• AraportID: AT3G47120
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 358
• Identity: 86/358 - (24%)
• Similarity: 133/358 - (37%)
• Gaps: 101/358 - (28%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDI-LIKN-------GYGFVEFEDYRDADDAVYELNGKEL 62
            |||||:|:.:.|.||...|..||...|: ||::       |:.|:.:||.|....||..|||..:
plant    38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALV 102

  Fly    63 LGERVVVE--------------------PARGTARGSNRDR----------YDDRYGGRRGGGGG 97
            ||..:.|:                    .|||..|...|..          :|::.....|.|
plant   103 LGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWG-- 165

  Fly    98 RYNEKNKNSR---SSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEG 159
              :|::::|:   ..:|.|..:...:                     |.||.|..|:.|...:|.
plant   166 --HEEDRSSKWDHDKNREGRGVCRAF---------------------QRGECTRGDSCKFSHDEK 207

  Fly   160 VVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRGGRSGGGGG---------SGRGRSRSSSSRS 215
            ..........:....|.|..:|||.       ::||.|.|..|         |.|||....:|..
plant   208 RAATTGWGHEEDRSSKWDQDKLNGA-------KKGGTSFGNRGDFKPDVEEKSYRGRGDGDASYG 265

  Fly   216 RSRSRRR-SRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRS-------RSRSNKSRDVSKSK 272
            |.:.|.| .|......||.....:.:.|.||..:   ..||..:       ..:.::::|..|.|
plant   266 RPKERERVDREDMGPRSRDAYDMKEQKRSGRYDN---AYSRRHNDEIDYVREDKGSRAQDWEKRK 327

  Fly   273 SKSHSRTRSRSPKRERDSRSRSRSVSKRESRSR 305
            ::|.   |.|:.:.|:|     |...:||.|.|
plant   328 AESR---RDRNDREEKD-----RDSLRREDRRR 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	29/95 (31%)
		RRM2_SRSF4_like	120..191	CDD:410012	12/70 (17%)
AT3G47120	NP_190296.1	RRM_ist3_like	27..115	CDD:409845	28/76 (37%)
		PABP-1234	38..>310	CDD:130689	73/306 (24%)