Protein Alignment B52 and NUC-L2

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 278
• Identity: 86/278 - (30%)
• Similarity: 121/278 - (43%)
• Gaps: 56/278 - (20%)

  Fly     3 GSR-VYVGGLPYGVRERDLERFFKGYGRTRDILIKN-------GYGFVEFEDYRDADDAVYELNG 59
            ||: ::.|.|.|.:...|:|.|||..|...|:.:.:       |||.:||....:|..|: |:||
plant   382 GSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKAL-EMNG 445

  Fly    60 KELLGERVVVEPA--RGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRL 122
            |.|||..|.::.|  |||.|.||        .||:|.|          |:|        ||.|
plant   446 KLLLGRDVRLDLANERGTPRNSN--------PGRKGEG----------SQS--------RTIY-- 482

  Fly   123 IVENLSSRVSWQDLKDYMR----QAGEVTYADAHKQRRNEGVVEFASLSDMKTAIE---KLDDTE 180
             |...||.:...::|..:|    :.||||.......|.......||.: |:.:..:   :|..:|
plant   483 -VRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYI-DLTSGFDEALQLSGSE 545

  Fly   181 LNGRRIHLVEDRRGGRSGGGGGSGRGRSRSS-----SSRSRSRSRRRSRSRRSSHS-RSKSRSRS 239
            :.|..|| ||:.|...|..|..|.|..:|.:     |.|:....|...|:.|..|| |...|.|.
plant   546 IGGGNIH-VEESRPRDSDEGRSSNRAPARGAPRGRHSDRAPRGGRFSDRAPRGRHSDRGAPRGRF 609

  Fly   240 KSRGGRSKSKSPVKSRSR 257
            .:| ||..||..|...|:
plant   610 STR-GRGPSKPSVMESSK 626

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	26/78 (33%)
		RRM2_SRSF4_like	120..191	CDD:241044	20/77 (26%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	26/76 (34%)
		RRM2_NUCLs	480..556	CDD:409885	22/80 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910