Protein Alignment B52 and RS31a

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_182184.1
• Gene: RS31a / 819273
• AraportID: AT2G46610
• Length: 250
• Species: Arabidopsis thaliana
• Alignment Length: 295
• Identity: 81/295 - (27%)
• Similarity: 125/295 - (42%)
• Gaps: 70/295 - (23%)

  Fly     6 VYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL-LGER-VV 68
            ||||...|..|..||||.|..:||.:.:.:|:||.||.|||.|||:||:...:.... .|.| :.
plant     4 VYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLS 68

  Fly    69 VEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGP----------PLRTEYRLI 123
            ||.|:.             :.|.||        |.::.::.|...|          |:||..|
plant    69 VEWAKD-------------FQGERG--------KPRDGKAVSNQRPTKTLFVINFDPIRTRER-- 110

  Fly   124 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHL 188
                       |::.:....|:|...   :.|||...|:||:..|...|::...:::|..:.:.:
plant   111 -----------DMERHFEPYGKVLNV---RMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSV 161

  Fly   189 VEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRS----RRSSHSRSKSRSRSKSRGGRSKSK 249
            ....|        .:|....|.:.||     ||||.|    ||.|...::.||....   |.|..
plant   162 EYALR--------EAGEREDRYAGSR-----RRRSPSPVYRRRPSPDYTRRRSPEYD---RYKGP 210

  Fly   250 SPVKSRSRSRSRSNKSRDVSKSKSKSHSRTRSRSP 284
            :|.: |.:|.....:|.|..:::::|....|||||
plant   211 APYE-RRKSPDYGRRSSDYGRARARSPGYDRSRSP 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	31/69 (45%)
		RRM2_SRSF4_like	120..191	CDD:410012	13/70 (19%)
RS31a	NP_182184.1	RRM_SF	2..73	CDD:473069	30/68 (44%)
		RRM_SF	96..165	CDD:473069	16/84 (19%)