DRSC/TRiP Functional Genomics Resources

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Protein Alignment B52 and Dazap1

DIOPT Version :10

Sequence 1:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:229 Identity:50/229 - (21%)
Similarity:98/229 - (42%) Gaps:46/229 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAV----YEL 57
            :::||||.:...:..|..:|..||...|.:|        ..|:|||:|:|.......:    :.|
Mouse    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTL 75

  Fly    58 NGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRL 122
            :|:.       ::|...|.||...:|...:.|.::|       .::.:|:|:           ::
Mouse    76 DGRN-------IDPKPCTPRGMQPERTRPKEGWQKG-------PRSDSSKSN-----------KI 115

  Fly   123 IVENLSSRVSWQDLKDYMRQAGEVTYA----DAHKQR-RNEGVVEFASLSDMKTAIEKLDDTELN 182
            .|..:.......:|::|.::.|.||..    ||.||| |..|.:.|.....:..|: .:...::.
Mouse   116 FVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIM 179

  Fly   183 GRRIHL--VEDRRG-GRSGGGGGSGRGRSRSSSS 213
            |:::.:  .|.|.. .::.|..|:.:..||.:.|
Mouse   180 GKKVEVKRAEPRDSKNQAPGQPGASQWGSRVAPS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 19/80 (24%)
RRM2_SRSF4_like 120..191 CDD:410012 16/77 (21%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 22/87 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 11/67 (16%)
RRM2_DAZAP1 111..190 CDD:409765 17/90 (19%)

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