Protein Alignment B52 and rbm4.1

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_955999.1
• Gene: rbm4.1 / 573001
• ZFINID: ZDB-GENE-030131-3902
• Length: 419
• Species: Danio rerio
• Alignment Length: 278
• Identity: 56/278 - (20%)
• Similarity: 93/278 - (33%)
• Gaps: 89/278 - (32%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 69
            :::||.|.......::...|..||:..:..|...:|||..:...:||:|:..|:...|.|..:.|
Zfish     3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIVKNFGFVHMDSKSEADEAIQNLHHYMLNGMAMNV 67

  Fly    70 EPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQ 134
            |.::|..:.|.:..                                        |.|:||..:.|
Zfish    68 EMSKGKPKTSTKPH----------------------------------------VGNISSSCTNQ 92

  Fly   135 DLKDYMRQAGEVT-------YADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHL---- 188
            :|:....:.|.|.       ||..|.:|          :.|...||..||:|...|:.:.:
Zfish    93 ELRAKFEEYGPVVECDIVKDYAFVHMER----------VEDAMEAISGLDNTAFQGKLMSVKLST 147

  Fly   189 --------VEDRRG----GRSG----------------GGGGSGRGRSRSSSSRSRSRSRRRSRS 225
                    :.:|.|    |:.|                |....|.|..|..|...|.|...|..|
Zfish   148 SRLRTAPGMGERTGCYRCGQEGHWSKECPLDQNGSYREGPSSEGFGPVRFDSGGDRGRGFHRGFS 212

  Fly   226 RRSSHSRSKSRSRSKSRG 243
            ...:::.|.:.|...:||
Zfish   213 GEPAYAGSFAPSHGFTRG 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	18/68 (26%)
		RRM2_SRSF4_like	120..191	CDD:410012	19/89 (21%)
rbm4.1	NP_955999.1	RRM1_RBM4	2..68	CDD:410018	16/64 (25%)
		RRM2_RBM4	78..144	CDD:410019	19/115 (17%)
		PTZ00368	148..>182	CDD:173561	4/33 (12%)
		ZnF_C2HC	161..176	CDD:197667	3/14 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	322..341
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	349..371