Protein Alignment B52 and cirbp

DIOPT Version :10

• Sequence 1: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001017228.1
• Gene: cirbp / 549982
• XenbaseID: XB-GENE-492781
• Length: 166
• Species: Xenopus tropicalis
• Alignment Length: 249
• Identity: 60/249 - (24%)
• Similarity: 81/249 - (32%)
• Gaps: 110/249 - (44%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVYELNGKE 61
            :::||||.:...|..||:.|..||:..::::        ..|:|||.||:..||.||:..:|||.
 Frog     7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKS 71

  Fly    62 LLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVEN 126
            :.|.::.|:.|   .:.||     ||.||.|||..|
 Frog    72 VDGRQIRVDQA---GKSSN-----DRRGGYRGGSSG----------------------------- 99

  Fly   127 LSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 191
                                                                    ||...
 Frog   100 --------------------------------------------------------GRGFF---- 104

  Fly   192 RRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSR---RSSHSRSKSRSRSKSR 242
             ||||..||||. ||...||...:||...:.|.||   ..||.....||....|
 Frog   105 -RGGRGRGGGGD-RGYGGSSRFENRSGGYQSSGSRDYYGRSHGSYGDRSGGSYR 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	26/76 (34%)
		RRM2_SRSF4_like	120..191	CDD:410012	2/70 (3%)
cirbp	NP_001017228.1	RRM_CIRBP_RBM3	6..85	CDD:409883	26/80 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	68..166		40/188 (21%)