Protein Alignment B52 and SF2

DIOPT Version :9

• Sequence 1: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Sequence 2: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 117/267 - (43%)
• Similarity: 146/267 - (54%)
• Gaps: 55/267 - (20%)

  Fly     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYG----FVEFEDYRDADDAVYELNGKELLGE 65
            |:|||.||..:|.:|::..|..:|:...:.:||..|    ||||||.|||||||...:|.:..|.
  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72

  Fly    66 RVVVEPAR----GTARGSNRDRYDDRYGGRRGGG--GGRYNEKNKNSRSSSRYGPPL-RTEYRLI 123
            |:.||..|    |:.||.||   :||  .|.|||  |||              |||. |::||::
  Fly    73 RLRVEFPRGGGPGSYRGGNR---NDR--SRDGGGRMGGR--------------GPPAKRSQYRVM 118

  Fly   124 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRR--- 185
            |..|.:..|||||||:||:||:|.:||.:|.  ..|||||....|||.||:||||:......
  Fly   119 VTGLPASGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEV 181

  Fly   186 --IHLVEDR--------RGGRSGGGGGSGRGRSRSSSSRSRSRS-----RRR-----SRSRRSSH 230
              |.:.||.        .||..|||||||.|.||....||||||     |||     |..||.|:
  Fly   182 AYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTYSPVRRQSY 246

  Fly   231 SRSKSRS 237
            |||:|||
  Fly   247 SRSRSRS 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	32/76 (42%)
		RRM2_SRSF4_like	120..191	CDD:241044	34/75 (45%)
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	31/71 (44%)
		RRM2_SRSF1_like	115..188	CDD:410013	34/74 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452129
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000217
OrthoInspector	1	1.000	-	-		otm68796
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1390
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.770